Protein–RNA interactions for Protein: P52657

GTF2A2, Transcription initiation factor IIA subunit 2, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2P52657 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.61■□□□□ 0.57
GTF2A2P52657 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GTF2A2P52657 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC18.61■□□□□ 0.57
GTF2A2P52657 RPL13AP25-201ENST00000484130 612 ntBASIC18.61■□□□□ 0.57
GTF2A2P52657 TPI1-206ENST00000488464 791 ntTSL 5 BASIC18.61■□□□□ 0.57
GTF2A2P52657 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GTF2A2P52657 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
GTF2A2P52657 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
GTF2A2P52657 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
GTF2A2P52657 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.61■□□□□ 0.57
GTF2A2P52657 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GTF2A2P52657 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
GTF2A2P52657 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.61■□□□□ 0.57
GTF2A2P52657 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GTF2A2P52657 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC18.61■□□□□ 0.57
GTF2A2P52657 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
GTF2A2P52657 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GTF2A2P52657 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GTF2A2P52657 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GTF2A2P52657 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GTF2A2P52657 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GTF2A2P52657 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GTF2A2P52657 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
GTF2A2P52657 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GTF2A2P52657 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
GTF2A2P52657 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2A2P52657 LINC01144-201ENST00000626198 1710 ntBASIC18.6■□□□□ 0.57
GTF2A2P52657 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2A2P52657 AC006538.1-201ENST00000567905 1585 ntBASIC18.6■□□□□ 0.57
GTF2A2P52657 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2A2P52657 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2A2P52657 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2A2P52657 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2A2P52657 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2A2P52657 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2A2P52657 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.6■□□□□ 0.57
GTF2A2P52657 SOCS2P1-201ENST00000417727 557 ntBASIC18.6■□□□□ 0.57
GTF2A2P52657 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.6■□□□□ 0.57
GTF2A2P52657 YBX1P6-201ENST00000442962 1002 ntBASIC18.6■□□□□ 0.57
GTF2A2P52657 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC18.6■□□□□ 0.57
GTF2A2P52657 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.6■□□□□ 0.57
GTF2A2P52657 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC18.6■□□□□ 0.57
GTF2A2P52657 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC18.6■□□□□ 0.57
GTF2A2P52657 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC18.6■□□□□ 0.57
GTF2A2P52657 AC079316.1-201ENST00000548397 411 ntBASIC18.6■□□□□ 0.57
GTF2A2P52657 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC18.6■□□□□ 0.57
GTF2A2P52657 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC18.6■□□□□ 0.57
GTF2A2P52657 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2A2P52657 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.6■□□□□ 0.57
GTF2A2P52657 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.6■□□□□ 0.57
GTF2A2P52657 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
GTF2A2P52657 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
GTF2A2P52657 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2A2P52657 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.6■□□□□ 0.57
GTF2A2P52657 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.6■□□□□ 0.57
GTF2A2P52657 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.6■□□□□ 0.57
GTF2A2P52657 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
GTF2A2P52657 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
GTF2A2P52657 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GTF2A2P52657 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
GTF2A2P52657 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.59■□□□□ 0.57
GTF2A2P52657 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GTF2A2P52657 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
GTF2A2P52657 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
GTF2A2P52657 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.59■□□□□ 0.57
GTF2A2P52657 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GTF2A2P52657 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
GTF2A2P52657 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
GTF2A2P52657 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GTF2A2P52657 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GTF2A2P52657 ZBTB12BP-201ENST00000314232 1122 ntBASIC18.59■□□□□ 0.57
GTF2A2P52657 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GTF2A2P52657 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GTF2A2P52657 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GTF2A2P52657 AC004945.1-201ENST00000416738 983 ntBASIC18.59■□□□□ 0.57
GTF2A2P52657 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.59■□□□□ 0.57
GTF2A2P52657 EEF1DP4-201ENST00000446006 880 ntBASIC18.59■□□□□ 0.57
GTF2A2P52657 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.59■□□□□ 0.57
GTF2A2P52657 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.59■□□□□ 0.57
GTF2A2P52657 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC18.59■□□□□ 0.57
GTF2A2P52657 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC18.59■□□□□ 0.57
GTF2A2P52657 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC18.59■□□□□ 0.57
GTF2A2P52657 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
GTF2A2P52657 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.59■□□□□ 0.57
GTF2A2P52657 AC010328.2-201ENST00000597698 1111 ntBASIC18.59■□□□□ 0.57
GTF2A2P52657 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.59■□□□□ 0.57
GTF2A2P52657 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.59■□□□□ 0.57
GTF2A2P52657 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.59■□□□□ 0.57
GTF2A2P52657 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
GTF2A2P52657 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GTF2A2P52657 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GTF2A2P52657 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GTF2A2P52657 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GTF2A2P52657 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
GTF2A2P52657 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.59■□□□□ 0.57
GTF2A2P52657 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.59■□□□□ 0.57
GTF2A2P52657 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
GTF2A2P52657 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
GTF2A2P52657 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
GTF2A2P52657 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms