Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
CKS2P33552 AP002414.1-201ENST00000391405 1147 ntBASIC12.07□□□□□ -0.48
CKS2P33552 CRAT-202ENST00000393384 973 ntTSL 2 BASIC12.07□□□□□ -0.48
CKS2P33552 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CKS2P33552 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CKS2P33552 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC12.07□□□□□ -0.48
CKS2P33552 ACTG1P4-201ENST00000425123 1122 ntBASIC12.07□□□□□ -0.48
CKS2P33552 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.07□□□□□ -0.48
CKS2P33552 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC12.07□□□□□ -0.48
CKS2P33552 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CKS2P33552 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC12.07□□□□□ -0.48
CKS2P33552 CD320-202ENST00000537716 1119 ntTSL 2 BASIC12.07□□□□□ -0.48
CKS2P33552 AC069224.1-201ENST00000566372 1715 ntBASIC12.07□□□□□ -0.48
CKS2P33552 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC12.07□□□□□ -0.48
CKS2P33552 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC12.07□□□□□ -0.48
CKS2P33552 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC12.07□□□□□ -0.48
CKS2P33552 AL138831.2-201ENST00000606564 490 ntBASIC12.07□□□□□ -0.48
CKS2P33552 AL390719.2-201ENST00000606993 987 ntBASIC12.07□□□□□ -0.48
CKS2P33552 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC12.07□□□□□ -0.48
CKS2P33552 LINC01144-201ENST00000626198 1710 ntBASIC12.07□□□□□ -0.48
CKS2P33552 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC12.07□□□□□ -0.48
CKS2P33552 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CKS2P33552 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.07□□□□□ -0.48
CKS2P33552 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CKS2P33552 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CKS2P33552 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
CKS2P33552 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CKS2P33552 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CKS2P33552 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CKS2P33552 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.07□□□□□ -0.48
CKS2P33552 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC12.07□□□□□ -0.48
CKS2P33552 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC12.07□□□□□ -0.48
CKS2P33552 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CKS2P33552 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CKS2P33552 HNRNPRP1-201ENST00000453465 1695 ntBASIC12.06□□□□□ -0.48
CKS2P33552 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS2P33552 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS2P33552 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC12.06□□□□□ -0.48
CKS2P33552 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.06□□□□□ -0.48
CKS2P33552 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.06□□□□□ -0.48
CKS2P33552 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS2P33552 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
CKS2P33552 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS2P33552 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
CKS2P33552 PCGF3-213ENST00000620529 1899 ntBASIC12.06□□□□□ -0.48
CKS2P33552 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
CKS2P33552 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
CKS2P33552 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS2P33552 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS2P33552 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.06□□□□□ -0.48
CKS2P33552 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
CKS2P33552 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS2P33552 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
CKS2P33552 DKFZP434H168-201ENST00000567381 1905 ntBASIC12.06□□□□□ -0.48
CKS2P33552 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CKS2P33552 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS2P33552 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CKS2P33552 AC138035.3-201ENST00000622706 2791 ntBASIC12.06□□□□□ -0.48
CKS2P33552 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.06□□□□□ -0.48
CKS2P33552 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
CKS2P33552 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS2P33552 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS2P33552 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC12.06□□□□□ -0.48
CKS2P33552 CD9-202ENST00000382515 1229 ntTSL 5 BASIC12.06□□□□□ -0.48
CKS2P33552 MIR648-201ENST00000385046 94 ntBASIC12.06□□□□□ -0.48
CKS2P33552 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC12.06□□□□□ -0.48
CKS2P33552 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CKS2P33552 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC12.06□□□□□ -0.48
CKS2P33552 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC12.06□□□□□ -0.48
CKS2P33552 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC12.06□□□□□ -0.48
CKS2P33552 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC12.06□□□□□ -0.48
CKS2P33552 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS2P33552 AC073592.5-201ENST00000624854 528 ntBASIC12.06□□□□□ -0.48
CKS2P33552 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
CKS2P33552 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CKS2P33552 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CKS2P33552 AC136621.1-201ENST00000624017 2304 ntBASIC12.06□□□□□ -0.48
CKS2P33552 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS2P33552 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS2P33552 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CKS2P33552 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC12.06□□□□□ -0.48
CKS2P33552 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CKS2P33552 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS2P33552 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CKS2P33552 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS2P33552 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC12.06□□□□□ -0.48
CKS2P33552 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
CKS2P33552 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC12.06□□□□□ -0.48
CKS2P33552 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC12.06□□□□□ -0.48
CKS2P33552 KRT17P2-201ENST00000300992 1314 ntBASIC12.06□□□□□ -0.48
CKS2P33552 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC12.06□□□□□ -0.48
CKS2P33552 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC12.06□□□□□ -0.48
CKS2P33552 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC12.06□□□□□ -0.48
CKS2P33552 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC12.06□□□□□ -0.48
CKS2P33552 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC12.06□□□□□ -0.48
CKS2P33552 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
CKS2P33552 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS2P33552 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS2P33552 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CKS2P33552 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms