Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COL8A2P25067 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL8A2P25067 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL8A2P25067 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL8A2P25067 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
COL8A2P25067 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.79□□□□□ -0.2
COL8A2P25067 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL8A2P25067 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
COL8A2P25067 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
COL8A2P25067 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC13.79□□□□□ -0.2
COL8A2P25067 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL8A2P25067 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COL8A2P25067 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL8A2P25067 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.79□□□□□ -0.2
COL8A2P25067 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COL8A2P25067 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.79□□□□□ -0.2
COL8A2P25067 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.79□□□□□ -0.2
COL8A2P25067 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.79□□□□□ -0.2
COL8A2P25067 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.79□□□□□ -0.2
COL8A2P25067 AL512638.1-201ENST00000457493 794 ntBASIC13.79□□□□□ -0.2
COL8A2P25067 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COL8A2P25067 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.79□□□□□ -0.2
COL8A2P25067 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
COL8A2P25067 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.79□□□□□ -0.2
COL8A2P25067 MIR4745-201ENST00000577608 62 ntBASIC13.79□□□□□ -0.2
COL8A2P25067 AC007967.4-201ENST00000614700 386 ntBASIC13.79□□□□□ -0.2
COL8A2P25067 AJ011932.1-201ENST00000621707 465 ntBASIC13.79□□□□□ -0.2
COL8A2P25067 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COL8A2P25067 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.79□□□□□ -0.2
COL8A2P25067 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL8A2P25067 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL8A2P25067 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COL8A2P25067 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL8A2P25067 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COL8A2P25067 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.79□□□□□ -0.2
COL8A2P25067 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COL8A2P25067 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL8A2P25067 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
COL8A2P25067 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL8A2P25067 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.79□□□□□ -0.2
COL8A2P25067 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL8A2P25067 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
COL8A2P25067 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL8A2P25067 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL8A2P25067 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COL8A2P25067 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.79□□□□□ -0.2
COL8A2P25067 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
COL8A2P25067 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL8A2P25067 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COL8A2P25067 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL8A2P25067 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
COL8A2P25067 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.78□□□□□ -0.2
COL8A2P25067 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL8A2P25067 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL8A2P25067 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL8A2P25067 PCGF3-213ENST00000620529 1899 ntBASIC13.78□□□□□ -0.2
COL8A2P25067 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL8A2P25067 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
COL8A2P25067 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
COL8A2P25067 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.78□□□□□ -0.2
COL8A2P25067 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL8A2P25067 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC13.78□□□□□ -0.2
COL8A2P25067 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL8A2P25067 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC13.78□□□□□ -0.2
COL8A2P25067 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL8A2P25067 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL8A2P25067 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
COL8A2P25067 AL353705.2-201ENST00000428243 662 ntBASIC13.78□□□□□ -0.2
COL8A2P25067 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL8A2P25067 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.78□□□□□ -0.2
COL8A2P25067 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.78□□□□□ -0.2
COL8A2P25067 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.78□□□□□ -0.2
COL8A2P25067 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL8A2P25067 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.78□□□□□ -0.2
COL8A2P25067 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
COL8A2P25067 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.78□□□□□ -0.2
COL8A2P25067 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL8A2P25067 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
COL8A2P25067 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
COL8A2P25067 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
COL8A2P25067 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL8A2P25067 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.78□□□□□ -0.2
COL8A2P25067 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
COL8A2P25067 AL589702.1-201ENST00000641229 1509 ntBASIC13.78□□□□□ -0.2
COL8A2P25067 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL8A2P25067 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.78□□□□□ -0.2
COL8A2P25067 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
COL8A2P25067 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.78□□□□□ -0.2
COL8A2P25067 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL8A2P25067 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.78□□□□□ -0.2
COL8A2P25067 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL8A2P25067 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
COL8A2P25067 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL8A2P25067 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL8A2P25067 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL8A2P25067 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL8A2P25067 HLA-A-202ENST00000376806 1854 ntBASIC13.78□□□□□ -0.2
COL8A2P25067 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
COL8A2P25067 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL8A2P25067 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms