Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 REEP1-202ENST00000453231 940 ntTSL 2 BASIC19.71■□□□□ 0.75
KCNA3P22001 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC19.71■□□□□ 0.75
KCNA3P22001 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
KCNA3P22001 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC19.71■□□□□ 0.75
KCNA3P22001 ADM-202ENST00000524948 584 ntTSL 2 BASIC19.71■□□□□ 0.75
KCNA3P22001 AC023310.1-201ENST00000554836 735 ntBASIC19.71■□□□□ 0.75
KCNA3P22001 AC005695.3-201ENST00000614522 232 ntBASIC19.71■□□□□ 0.75
KCNA3P22001 METTL26-214ENST00000614890 801 ntTSL 3 BASIC19.71■□□□□ 0.75
KCNA3P22001 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KCNA3P22001 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
KCNA3P22001 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.71■□□□□ 0.75
KCNA3P22001 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KCNA3P22001 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KCNA3P22001 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KCNA3P22001 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
KCNA3P22001 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC19.71■□□□□ 0.75
KCNA3P22001 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.71■□□□□ 0.75
KCNA3P22001 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19.71■□□□□ 0.75
KCNA3P22001 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCNA3P22001 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
KCNA3P22001 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.7■□□□□ 0.74
KCNA3P22001 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCNA3P22001 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCNA3P22001 HARS-202ENST00000415192 1401 ntTSL 2 BASIC19.7■□□□□ 0.74
KCNA3P22001 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
KCNA3P22001 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCNA3P22001 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCNA3P22001 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCNA3P22001 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCNA3P22001 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCNA3P22001 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC19.7■□□□□ 0.74
KCNA3P22001 HIST2H2BC-201ENST00000498492 580 ntBASIC19.7■□□□□ 0.74
KCNA3P22001 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC19.7■□□□□ 0.74
KCNA3P22001 CHMP4BP1-201ENST00000556017 588 ntBASIC19.7■□□□□ 0.74
KCNA3P22001 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KCNA3P22001 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
KCNA3P22001 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC19.7■□□□□ 0.74
KCNA3P22001 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
KCNA3P22001 AGER-206ENST00000375070 1463 ntTSL 5 BASIC19.7■□□□□ 0.74
KCNA3P22001 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KCNA3P22001 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KCNA3P22001 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KCNA3P22001 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.7■□□□□ 0.74
KCNA3P22001 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC19.7■□□□□ 0.74
KCNA3P22001 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCNA3P22001 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KCNA3P22001 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNA3P22001 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNA3P22001 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNA3P22001 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNA3P22001 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
KCNA3P22001 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNA3P22001 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNA3P22001 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
KCNA3P22001 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19.69■□□□□ 0.74
KCNA3P22001 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
KCNA3P22001 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNA3P22001 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNA3P22001 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.69■□□□□ 0.74
KCNA3P22001 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KCNA3P22001 RPS3-201ENST00000278572 907 ntTSL 3 BASIC19.69■□□□□ 0.74
KCNA3P22001 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNA3P22001 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNA3P22001 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC19.69■□□□□ 0.74
KCNA3P22001 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KCNA3P22001 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC19.69■□□□□ 0.74
KCNA3P22001 ELP6-209ENST00000446787 894 ntTSL 3 BASIC19.69■□□□□ 0.74
KCNA3P22001 Z93015.1-201ENST00000451718 390 ntBASIC19.69■□□□□ 0.74
KCNA3P22001 AC022137.2-201ENST00000503482 481 ntBASIC19.69■□□□□ 0.74
KCNA3P22001 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNA3P22001 HCG18-245ENST00000602550 559 ntTSL 4 BASIC19.69■□□□□ 0.74
KCNA3P22001 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC19.69■□□□□ 0.74
KCNA3P22001 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNA3P22001 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.69■□□□□ 0.74
KCNA3P22001 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNA3P22001 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KCNA3P22001 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNA3P22001 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.69■□□□□ 0.74
KCNA3P22001 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNA3P22001 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.69■□□□□ 0.74
KCNA3P22001 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KCNA3P22001 REXO1L8P-201ENST00000604378 1897 ntBASIC19.69■□□□□ 0.74
KCNA3P22001 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KCNA3P22001 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
KCNA3P22001 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
KCNA3P22001 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNA3P22001 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
KCNA3P22001 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNA3P22001 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
KCNA3P22001 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KCNA3P22001 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.68■□□□□ 0.74
KCNA3P22001 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC19.68■□□□□ 0.74
KCNA3P22001 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
KCNA3P22001 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNA3P22001 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KCNA3P22001 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNA3P22001 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KCNA3P22001 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC19.68■□□□□ 0.74
KCNA3P22001 BTBD6P1-201ENST00000412176 1267 ntBASIC19.68■□□□□ 0.74
KCNA3P22001 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms