Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 SPDYE9P-201ENST00000570642 692 ntBASIC16.49■□□□□ 0.23
HLA-DPA1P20036 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 AL365330.1-201ENST00000607459 531 ntBASIC16.49■□□□□ 0.23
HLA-DPA1P20036 SPDYE10P-202ENST00000612005 668 ntBASIC16.49■□□□□ 0.23
HLA-DPA1P20036 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 SPDYE8P-202ENST00000612377 668 ntBASIC16.49■□□□□ 0.23
HLA-DPA1P20036 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.49■□□□□ 0.23
HLA-DPA1P20036 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 AL589702.1-201ENST00000641229 1509 ntBASIC16.49■□□□□ 0.23
HLA-DPA1P20036 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.48■□□□□ 0.23
HLA-DPA1P20036 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 AC005829.1-201ENST00000570002 483 ntBASIC16.48■□□□□ 0.23
HLA-DPA1P20036 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 ELL2P1-201ENST00000413990 1906 ntBASIC16.48■□□□□ 0.23
HLA-DPA1P20036 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.48■□□□□ 0.23
HLA-DPA1P20036 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DPA1P20036 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DPA1P20036 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DPA1P20036 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DPA1P20036 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.47■□□□□ 0.23
HLA-DPA1P20036 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DPA1P20036 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DPA1P20036 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DPA1P20036 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DPA1P20036 MIR648-201ENST00000385046 94 ntBASIC16.47■□□□□ 0.23
HLA-DPA1P20036 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DPA1P20036 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.47■□□□□ 0.23
HLA-DPA1P20036 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.47■□□□□ 0.23
HLA-DPA1P20036 AC243562.1-201ENST00000560672 389 ntBASIC16.47■□□□□ 0.23
HLA-DPA1P20036 AL138918.1-201ENST00000568306 659 ntBASIC16.47■□□□□ 0.23
HLA-DPA1P20036 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.47■□□□□ 0.23
HLA-DPA1P20036 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.47■□□□□ 0.23
HLA-DPA1P20036 AC027307.2-201ENST00000591252 911 ntBASIC16.47■□□□□ 0.23
HLA-DPA1P20036 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.47■□□□□ 0.23
HLA-DPA1P20036 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.47■□□□□ 0.23
HLA-DPA1P20036 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.47■□□□□ 0.23
HLA-DPA1P20036 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DPA1P20036 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DPA1P20036 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DPA1P20036 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DPA1P20036 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DPA1P20036 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DPA1P20036 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DPA1P20036 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.47■□□□□ 0.23
HLA-DPA1P20036 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DPA1P20036 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms