Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC27.33■■□□□ 1.97
CFTRP13569 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CFTRP13569 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CFTRP13569 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CFTRP13569 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
CFTRP13569 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC27.33■■□□□ 1.97
CFTRP13569 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC27.33■■□□□ 1.97
CFTRP13569 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CFTRP13569 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
CFTRP13569 CYP2AB1P-202ENST00000454440 1456 ntBASIC27.33■■□□□ 1.97
CFTRP13569 UPF3AP2-201ENST00000457924 1132 ntBASIC27.33■■□□□ 1.97
CFTRP13569 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC27.33■■□□□ 1.97
CFTRP13569 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC27.33■■□□□ 1.97
CFTRP13569 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CFTRP13569 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC27.33■■□□□ 1.97
CFTRP13569 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CFTRP13569 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC27.33■■□□□ 1.97
CFTRP13569 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
CFTRP13569 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC27.33■■□□□ 1.97
CFTRP13569 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC27.33■■□□□ 1.97
CFTRP13569 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC27.33■■□□□ 1.97
CFTRP13569 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CFTRP13569 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
CFTRP13569 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CFTRP13569 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
CFTRP13569 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC27.33■■□□□ 1.97
CFTRP13569 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC27.32■■□□□ 1.96
CFTRP13569 AHCYP2-201ENST00000430630 1300 ntBASIC27.32■■□□□ 1.96
CFTRP13569 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC27.32■■□□□ 1.96
CFTRP13569 AL662890.1-201ENST00000396818 632 ntBASIC27.32■■□□□ 1.96
CFTRP13569 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC27.32■■□□□ 1.96
CFTRP13569 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC27.32■■□□□ 1.96
CFTRP13569 NUS1P3-201ENST00000423502 862 ntBASIC27.32■■□□□ 1.96
CFTRP13569 HSPB1P2-201ENST00000448722 546 ntBASIC27.32■■□□□ 1.96
CFTRP13569 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC27.32■■□□□ 1.96
CFTRP13569 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC27.32■■□□□ 1.96
CFTRP13569 CYGB-203ENST00000589145 788 ntTSL 3 BASIC27.32■■□□□ 1.96
CFTRP13569 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
CFTRP13569 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC27.32■■□□□ 1.96
CFTRP13569 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CFTRP13569 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC27.32■■□□□ 1.96
CFTRP13569 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
CFTRP13569 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CFTRP13569 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC27.32■■□□□ 1.96
CFTRP13569 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CFTRP13569 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC27.32■■□□□ 1.96
CFTRP13569 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CFTRP13569 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC27.32■■□□□ 1.96
CFTRP13569 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC27.32■■□□□ 1.96
CFTRP13569 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CFTRP13569 MIR4706-201ENST00000582134 82 ntBASIC27.32■■□□□ 1.96
CFTRP13569 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
CFTRP13569 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC27.31■■□□□ 1.96
CFTRP13569 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC27.31■■□□□ 1.96
CFTRP13569 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
CFTRP13569 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC27.31■■□□□ 1.96
CFTRP13569 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
CFTRP13569 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC27.31■■□□□ 1.96
CFTRP13569 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CFTRP13569 HNRNPA1P32-201ENST00000396326 963 ntBASIC27.31■■□□□ 1.96
CFTRP13569 GGCT-203ENST00000409144 836 ntTSL 2 BASIC27.31■■□□□ 1.96
CFTRP13569 KRTAP10-13P-201ENST00000412914 571 ntBASIC27.31■■□□□ 1.96
CFTRP13569 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC27.31■■□□□ 1.96
CFTRP13569 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CFTRP13569 AC006453.4-201ENST00000636949 1252 ntBASIC27.31■■□□□ 1.96
CFTRP13569 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CFTRP13569 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CFTRP13569 AC015818.8-201ENST00000587907 1519 ntBASIC27.3■■□□□ 1.96
CFTRP13569 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
CFTRP13569 HINT2P1-201ENST00000419438 481 ntBASIC27.3■■□□□ 1.96
CFTRP13569 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC27.3■■□□□ 1.96
CFTRP13569 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC27.3■■□□□ 1.96
CFTRP13569 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC27.3■■□□□ 1.96
CFTRP13569 HOMER2P2-201ENST00000451621 847 ntBASIC27.3■■□□□ 1.96
CFTRP13569 PHKG1P2-201ENST00000457537 863 ntBASIC27.3■■□□□ 1.96
CFTRP13569 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CFTRP13569 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC27.3■■□□□ 1.96
CFTRP13569 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC27.3■■□□□ 1.96
CFTRP13569 HCG18-245ENST00000602550 559 ntTSL 4 BASIC27.3■■□□□ 1.96
CFTRP13569 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC27.3■■□□□ 1.96
CFTRP13569 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC27.3■■□□□ 1.96
CFTRP13569 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CFTRP13569 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CFTRP13569 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC27.29■■□□□ 1.96
CFTRP13569 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
CFTRP13569 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
CFTRP13569 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC27.29■■□□□ 1.96
CFTRP13569 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
CFTRP13569 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC27.29■■□□□ 1.96
CFTRP13569 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
CFTRP13569 CMC2-214ENST00000565925 640 ntTSL 5 BASIC27.29■■□□□ 1.96
CFTRP13569 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC27.29■■□□□ 1.96
CFTRP13569 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC27.29■■□□□ 1.96
CFTRP13569 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CFTRP13569 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
CFTRP13569 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
CFTRP13569 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC27.29■■□□□ 1.96
CFTRP13569 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CFTRP13569 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CFTRP13569 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC27.29■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms