Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AC009477.1-201ENST00000452936 217 ntBASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 AC063926.2-201ENST00000623766 1308 ntBASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB40ALP0C0E4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 CRB3P1-201ENST00000449338 276 ntBASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 BANF1P1-201ENST00000553684 263 ntBASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 AC005225.4-201ENST00000557330 545 ntBASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 AL133215.2-201ENST00000609242 977 ntBASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 AL358472.5-202ENST00000641448 1267 ntBASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RAB40ALP0C0E4 GPAA1P2-202ENST00000606848 1787 ntBASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 RPL37AP1-201ENST00000412502 279 ntBASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 HLA-J-202ENST00000469281 1241 ntBASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms