Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM3O75382 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
TRIM3O75382 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM3O75382 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
TRIM3O75382 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM3O75382 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRIM3O75382 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM3O75382 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
TRIM3O75382 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM3O75382 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM3O75382 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.29■□□□□ 0.04
TRIM3O75382 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM3O75382 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM3O75382 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM3O75382 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM3O75382 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TRIM3O75382 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TRIM3O75382 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
TRIM3O75382 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM3O75382 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM3O75382 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM3O75382 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TRIM3O75382 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM3O75382 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.28■□□□□ 0.04
TRIM3O75382 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.28■□□□□ 0.04
TRIM3O75382 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM3O75382 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.28■□□□□ 0.04
TRIM3O75382 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM3O75382 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM3O75382 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.28■□□□□ 0.04
TRIM3O75382 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.28■□□□□ 0.04
TRIM3O75382 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TRIM3O75382 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
TRIM3O75382 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRIM3O75382 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.28■□□□□ 0.04
TRIM3O75382 AC254562.1-201ENST00000417586 456 ntBASIC15.28■□□□□ 0.04
TRIM3O75382 RPS8P6-201ENST00000426177 609 ntBASIC15.28■□□□□ 0.04
TRIM3O75382 ADH5P3-201ENST00000433842 1137 ntBASIC15.28■□□□□ 0.04
TRIM3O75382 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM3O75382 DNAJB3-202ENST00000449667 1266 ntBASIC15.28■□□□□ 0.04
TRIM3O75382 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TRIM3O75382 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.28■□□□□ 0.04
TRIM3O75382 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TRIM3O75382 AC013467.2-201ENST00000605472 835 ntBASIC15.28■□□□□ 0.04
TRIM3O75382 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM3O75382 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.28■□□□□ 0.04
TRIM3O75382 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TRIM3O75382 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.28■□□□□ 0.04
TRIM3O75382 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM3O75382 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM3O75382 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.28■□□□□ 0.04
TRIM3O75382 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM3O75382 AC024909.3-201ENST00000611513 2257 ntBASIC15.28■□□□□ 0.04
TRIM3O75382 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM3O75382 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM3O75382 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM3O75382 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM3O75382 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM3O75382 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM3O75382 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM3O75382 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.28■□□□□ 0.04
TRIM3O75382 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM3O75382 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM3O75382 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM3O75382 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TRIM3O75382 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM3O75382 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.27■□□□□ 0.04
TRIM3O75382 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM3O75382 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM3O75382 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM3O75382 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM3O75382 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM3O75382 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TRIM3O75382 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRIM3O75382 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.27■□□□□ 0.04
TRIM3O75382 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.27■□□□□ 0.04
TRIM3O75382 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.27■□□□□ 0.04
TRIM3O75382 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TRIM3O75382 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM3O75382 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.27■□□□□ 0.04
TRIM3O75382 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM3O75382 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM3O75382 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM3O75382 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.27■□□□□ 0.04
TRIM3O75382 PMS2P4-201ENST00000412466 1052 ntBASIC15.27■□□□□ 0.04
TRIM3O75382 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM3O75382 AL355306.1-201ENST00000415580 579 ntBASIC15.27■□□□□ 0.04
TRIM3O75382 AC092474.2-201ENST00000424288 719 ntBASIC15.27■□□□□ 0.04
TRIM3O75382 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.27■□□□□ 0.04
TRIM3O75382 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM3O75382 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.27■□□□□ 0.04
TRIM3O75382 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.27■□□□□ 0.04
TRIM3O75382 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.27■□□□□ 0.04
TRIM3O75382 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.27■□□□□ 0.04
TRIM3O75382 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM3O75382 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM3O75382 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.27■□□□□ 0.04
TRIM3O75382 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.27■□□□□ 0.04
TRIM3O75382 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.27■□□□□ 0.04
TRIM3O75382 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms