Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC15.64■□□□□ 0.09
GFRA3O60609 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC15.64■□□□□ 0.09
GFRA3O60609 AC024681.1-201ENST00000521917 487 ntBASIC15.64■□□□□ 0.09
GFRA3O60609 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC15.64■□□□□ 0.09
GFRA3O60609 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GFRA3O60609 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.64■□□□□ 0.09
GFRA3O60609 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
GFRA3O60609 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.64■□□□□ 0.09
GFRA3O60609 RN7SL774P-201ENST00000577467 290 ntBASIC15.64■□□□□ 0.09
GFRA3O60609 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
GFRA3O60609 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GFRA3O60609 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GFRA3O60609 AC007663.3-201ENST00000609632 465 ntBASIC15.64■□□□□ 0.09
GFRA3O60609 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.64■□□□□ 0.09
GFRA3O60609 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC15.64■□□□□ 0.09
GFRA3O60609 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GFRA3O60609 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GFRA3O60609 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GFRA3O60609 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GFRA3O60609 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
GFRA3O60609 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.64■□□□□ 0.09
GFRA3O60609 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GFRA3O60609 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GFRA3O60609 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
GFRA3O60609 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
GFRA3O60609 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
GFRA3O60609 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
GFRA3O60609 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
GFRA3O60609 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
GFRA3O60609 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
GFRA3O60609 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
GFRA3O60609 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.63■□□□□ 0.09
GFRA3O60609 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
GFRA3O60609 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
GFRA3O60609 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.63■□□□□ 0.09
GFRA3O60609 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GFRA3O60609 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.63■□□□□ 0.09
GFRA3O60609 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
GFRA3O60609 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GFRA3O60609 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
GFRA3O60609 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
GFRA3O60609 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
GFRA3O60609 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.63■□□□□ 0.09
GFRA3O60609 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.63■□□□□ 0.09
GFRA3O60609 RPL13P2-201ENST00000440687 659 ntBASIC15.63■□□□□ 0.09
GFRA3O60609 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC15.63■□□□□ 0.09
GFRA3O60609 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.63■□□□□ 0.09
GFRA3O60609 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
GFRA3O60609 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC15.63■□□□□ 0.09
GFRA3O60609 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.63■□□□□ 0.09
GFRA3O60609 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC15.63■□□□□ 0.09
GFRA3O60609 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
GFRA3O60609 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.63■□□□□ 0.09
GFRA3O60609 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.63■□□□□ 0.09
GFRA3O60609 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GFRA3O60609 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.63■□□□□ 0.09
GFRA3O60609 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
GFRA3O60609 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GFRA3O60609 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.63■□□□□ 0.09
GFRA3O60609 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GFRA3O60609 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
GFRA3O60609 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.63■□□□□ 0.09
GFRA3O60609 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
GFRA3O60609 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
GFRA3O60609 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GFRA3O60609 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
GFRA3O60609 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
GFRA3O60609 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GFRA3O60609 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GFRA3O60609 AC008132.1-202ENST00000342005 1389 ntBASIC15.62■□□□□ 0.09
GFRA3O60609 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GFRA3O60609 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
GFRA3O60609 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GFRA3O60609 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
GFRA3O60609 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GFRA3O60609 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
GFRA3O60609 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GFRA3O60609 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
GFRA3O60609 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC15.62■□□□□ 0.09
GFRA3O60609 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
GFRA3O60609 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GFRA3O60609 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GFRA3O60609 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
GFRA3O60609 ACKR1-201ENST00000368121 1240 ntBASIC15.62■□□□□ 0.09
GFRA3O60609 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GFRA3O60609 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.62■□□□□ 0.09
GFRA3O60609 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
GFRA3O60609 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
GFRA3O60609 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.62■□□□□ 0.09
GFRA3O60609 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC15.62■□□□□ 0.09
GFRA3O60609 HSPB1P2-201ENST00000448722 546 ntBASIC15.62■□□□□ 0.09
GFRA3O60609 AC090142.2-201ENST00000483263 416 ntBASIC15.62■□□□□ 0.09
GFRA3O60609 AC010234.1-201ENST00000494599 870 ntBASIC15.62■□□□□ 0.09
GFRA3O60609 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
GFRA3O60609 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
GFRA3O60609 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.62■□□□□ 0.09
GFRA3O60609 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.62■□□□□ 0.09
GFRA3O60609 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.62■□□□□ 0.09
GFRA3O60609 DGAT2L7P-201ENST00000602462 744 ntBASIC15.62■□□□□ 0.09
GFRA3O60609 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms