Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 FO393414.2-201ENST00000405153 598 ntBASIC20.75■□□□□ 0.91
KCNQ3O43525 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
KCNQ3O43525 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC20.75■□□□□ 0.91
KCNQ3O43525 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC20.75■□□□□ 0.91
KCNQ3O43525 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KCNQ3O43525 NOP2-220ENST00000545915 630 ntTSL 2 BASIC20.75■□□□□ 0.91
KCNQ3O43525 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
KCNQ3O43525 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
KCNQ3O43525 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
KCNQ3O43525 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNQ3O43525 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KCNQ3O43525 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNQ3O43525 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNQ3O43525 AD000864.1-201ENST00000624076 2295 ntBASIC20.75■□□□□ 0.91
KCNQ3O43525 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KCNQ3O43525 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.75■□□□□ 0.91
KCNQ3O43525 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNQ3O43525 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
KCNQ3O43525 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNQ3O43525 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
KCNQ3O43525 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KCNQ3O43525 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNQ3O43525 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
KCNQ3O43525 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNQ3O43525 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNQ3O43525 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNQ3O43525 AC087499.6-201ENST00000411576 835 ntBASIC20.74■□□□□ 0.91
KCNQ3O43525 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC20.74■□□□□ 0.91
KCNQ3O43525 MYCLP2-201ENST00000449268 967 ntBASIC20.74■□□□□ 0.91
KCNQ3O43525 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
KCNQ3O43525 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC20.74■□□□□ 0.91
KCNQ3O43525 AC055876.2-201ENST00000531834 546 ntBASIC20.74■□□□□ 0.91
KCNQ3O43525 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC20.74■□□□□ 0.91
KCNQ3O43525 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
KCNQ3O43525 AC074044.1-201ENST00000609673 707 ntBASIC20.74■□□□□ 0.91
KCNQ3O43525 AL008721.1-201ENST00000609964 604 ntBASIC20.74■□□□□ 0.91
KCNQ3O43525 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KCNQ3O43525 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC20.74■□□□□ 0.91
KCNQ3O43525 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNQ3O43525 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC20.74■□□□□ 0.91
KCNQ3O43525 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KCNQ3O43525 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNQ3O43525 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
KCNQ3O43525 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNQ3O43525 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KCNQ3O43525 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
KCNQ3O43525 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
KCNQ3O43525 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KCNQ3O43525 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KCNQ3O43525 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
KCNQ3O43525 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
KCNQ3O43525 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC20.73■□□□□ 0.91
KCNQ3O43525 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC20.73■□□□□ 0.91
KCNQ3O43525 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC20.73■□□□□ 0.91
KCNQ3O43525 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
KCNQ3O43525 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KCNQ3O43525 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC20.73■□□□□ 0.91
KCNQ3O43525 FXR1-221ENST00000491674 365 ntTSL 2 BASIC20.73■□□□□ 0.91
KCNQ3O43525 AC123567.1-201ENST00000548294 1261 ntBASIC20.73■□□□□ 0.91
KCNQ3O43525 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC20.73■□□□□ 0.91
KCNQ3O43525 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC20.73■□□□□ 0.91
KCNQ3O43525 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
KCNQ3O43525 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
KCNQ3O43525 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
KCNQ3O43525 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
KCNQ3O43525 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KCNQ3O43525 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KCNQ3O43525 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KCNQ3O43525 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNQ3O43525 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC20.72■□□□□ 0.91
KCNQ3O43525 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNQ3O43525 AC098614.1-201ENST00000368528 745 ntBASIC20.72■□□□□ 0.91
KCNQ3O43525 MXI1-205ENST00000393134 889 ntTSL 2 BASIC20.72■□□□□ 0.91
KCNQ3O43525 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC20.72■□□□□ 0.91
KCNQ3O43525 EEF1DP4-201ENST00000446006 880 ntBASIC20.72■□□□□ 0.91
KCNQ3O43525 NME4-207ENST00000450036 985 ntTSL 3 BASIC20.72■□□□□ 0.91
KCNQ3O43525 KRT17P7-201ENST00000451704 1104 ntBASIC20.72■□□□□ 0.91
KCNQ3O43525 RN7SL752P-201ENST00000463779 287 ntBASIC20.72■□□□□ 0.91
KCNQ3O43525 SUOX-214ENST00000551841 906 ntTSL 3 BASIC20.72■□□□□ 0.91
KCNQ3O43525 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC20.72■□□□□ 0.91
KCNQ3O43525 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
KCNQ3O43525 SPIB-207ENST00000597855 564 ntTSL 4 BASIC20.72■□□□□ 0.91
KCNQ3O43525 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC20.72■□□□□ 0.91
KCNQ3O43525 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNQ3O43525 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNQ3O43525 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
KCNQ3O43525 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC20.72■□□□□ 0.91
KCNQ3O43525 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNQ3O43525 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.72■□□□□ 0.91
KCNQ3O43525 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.72■□□□□ 0.91
KCNQ3O43525 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC20.72■□□□□ 0.91
KCNQ3O43525 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC20.72■□□□□ 0.91
KCNQ3O43525 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNQ3O43525 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNQ3O43525 Z97205.2-201ENST00000564697 1639 ntBASIC20.71■□□□□ 0.91
KCNQ3O43525 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC20.71■□□□□ 0.91
KCNQ3O43525 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
KCNQ3O43525 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KCNQ3O43525 CDC14C-201ENST00000428251 1719 ntBASIC20.71■□□□□ 0.91
KCNQ3O43525 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms