Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC66A2RUB6 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC66A2RUB6 MIR5100-201ENST00000579544 119 ntBASIC17.79■□□□□ 0.44
CCDC66A2RUB6 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.79■□□□□ 0.44
CCDC66A2RUB6 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC66A2RUB6 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CCDC66A2RUB6 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC66A2RUB6 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC66A2RUB6 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC66A2RUB6 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC66A2RUB6 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC66A2RUB6 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC66A2RUB6 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC66A2RUB6 KRT8P49-201ENST00000604166 1432 ntBASIC17.79■□□□□ 0.44
CCDC66A2RUB6 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC66A2RUB6 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC66A2RUB6 AC013268.4-201ENST00000637413 2228 ntBASIC17.79■□□□□ 0.44
CCDC66A2RUB6 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC66A2RUB6 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
CCDC66A2RUB6 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC66A2RUB6 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC66A2RUB6 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC66A2RUB6 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC66A2RUB6 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC66A2RUB6 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC66A2RUB6 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC66A2RUB6 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CCDC66A2RUB6 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC66A2RUB6 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC66A2RUB6 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC66A2RUB6 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC66A2RUB6 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC66A2RUB6 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CCDC66A2RUB6 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC66A2RUB6 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC66A2RUB6 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CCDC66A2RUB6 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC66A2RUB6 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC66A2RUB6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.78■□□□□ 0.44
CCDC66A2RUB6 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CCDC66A2RUB6 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.78■□□□□ 0.44
CCDC66A2RUB6 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
CCDC66A2RUB6 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC66A2RUB6 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC66A2RUB6 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC66A2RUB6 AC099336.1-202ENST00000602961 463 ntBASIC17.78■□□□□ 0.44
CCDC66A2RUB6 NPAP1P7-201ENST00000613027 823 ntBASIC17.78■□□□□ 0.44
CCDC66A2RUB6 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC66A2RUB6 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC66A2RUB6 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CCDC66A2RUB6 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC66A2RUB6 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC66A2RUB6 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC66A2RUB6 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC66A2RUB6 AC006538.1-201ENST00000567905 1585 ntBASIC17.78■□□□□ 0.44
CCDC66A2RUB6 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC66A2RUB6 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC66A2RUB6 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC66A2RUB6 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC66A2RUB6 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC66A2RUB6 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC66A2RUB6 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC66A2RUB6 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC66A2RUB6 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC66A2RUB6 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
CCDC66A2RUB6 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC66A2RUB6 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC66A2RUB6 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC66A2RUB6 AC097376.2-205ENST00000610159 5334 ntBASIC17.77■□□□□ 0.44
CCDC66A2RUB6 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC66A2RUB6 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC66A2RUB6 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC66A2RUB6 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC66A2RUB6 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC66A2RUB6 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC66A2RUB6 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC66A2RUB6 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC66A2RUB6 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC66A2RUB6 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CCDC66A2RUB6 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC66A2RUB6 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC66A2RUB6 AC013467.2-201ENST00000605472 835 ntBASIC17.77■□□□□ 0.44
CCDC66A2RUB6 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC66A2RUB6 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC66A2RUB6 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CCDC66A2RUB6 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CCDC66A2RUB6 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC66A2RUB6 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC66A2RUB6 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CCDC66A2RUB6 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC66A2RUB6 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CCDC66A2RUB6 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC66A2RUB6 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.77■□□□□ 0.43
CCDC66A2RUB6 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC17.77■□□□□ 0.43
CCDC66A2RUB6 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.77■□□□□ 0.43
CCDC66A2RUB6 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC66A2RUB6 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC66A2RUB6 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC66A2RUB6 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC66A2RUB6 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms