Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 AC092119.3-201ENST00000612618 583 ntBASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRAV5A0A0B4J249 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 ISCU-203ENST00000431221 799 ntTSL 2 BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 KRT16P4-201ENST00000453883 522 ntBASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 KRT18P21-201ENST00000515767 1272 ntBASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 AL049597.2-201ENST00000565575 961 ntBASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 AC005622.1-201ENST00000636801 1703 ntBASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC12.74□□□□□ -0.37
TRAV5A0A0B4J249 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
TRAV5A0A0B4J249 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms