Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 AL590627.1-203ENST00000421194 1026 ntBASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 HCG4B-203ENST00000450128 991 ntBASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 CD63-204ENST00000546939 779 ntTSL 3 BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 AC023141.13-201ENST00000604991 943 ntBASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 AC021097.1-201ENST00000607902 574 ntBASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 AC010507.1-201ENST00000633895 436 ntBASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 BEX3-201ENST00000361298 921 ntTSL 2 BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 RNU1-129P-201ENST00000384064 167 ntBASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 HMGA1P7-201ENST00000406908 502 ntBASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 IGLL3P-201ENST00000412472 434 ntBASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 CRCP-205ENST00000431089 942 ntTSL 2 BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 AC007967.2-201ENST00000432613 625 ntBASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 RPL13AP23-201ENST00000480739 586 ntBASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 AC096734.2-201ENST00000562054 433 ntBASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 U1.21-201ENST00000580816 167 ntBASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TRGV1A0A0A0MS02 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms