Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 AC092364.2-201ENST00000596710 2692 ntBASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 MIR661-201ENST00000384842 89 ntBASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 AC002472.2-201ENST00000442739 958 ntBASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 KRT18P34-201ENST00000488218 1270 ntBASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 AC243562.1-201ENST00000560672 389 ntBASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 TUBB3P1-201ENST00000405796 1332 ntBASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHB1Q9Y5F3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHB1Q9Y5F3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHB1Q9Y5F3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHB1Q9Y5F3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHB1Q9Y5F3 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
PCDHB1Q9Y5F3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.33■□□□□ 0.21
PCDHB1Q9Y5F3 AL513523.2-202ENST00000427283 2040 ntBASIC16.33■□□□□ 0.21
PCDHB1Q9Y5F3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHB1Q9Y5F3 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHB1Q9Y5F3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHB1Q9Y5F3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHB1Q9Y5F3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 UGT1A2P-201ENST00000454886 866 ntBASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 RN7SL589P-201ENST00000481268 310 ntBASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 AL135744.1-201ENST00000565098 629 ntBASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHB1Q9Y5F3 AL161645.1-201ENST00000622716 1255 ntBASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms