Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
RIMBP3Q9UFD9 AC116353.5-201ENST00000638148 1699 ntBASIC25.21■■□□□ 1.63
RIMBP3Q9UFD9 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC25.21■■□□□ 1.63
RIMBP3Q9UFD9 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC25.21■■□□□ 1.63
RIMBP3Q9UFD9 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC25.2■■□□□ 1.63
RIMBP3Q9UFD9 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC25.2■■□□□ 1.63
RIMBP3Q9UFD9 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
RIMBP3Q9UFD9 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.63
RIMBP3Q9UFD9 AC074138.1-201ENST00000611182 1303 ntBASIC25.2■■□□□ 1.62
RIMBP3Q9UFD9 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RIMBP3Q9UFD9 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
RIMBP3Q9UFD9 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
RIMBP3Q9UFD9 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RIMBP3Q9UFD9 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
RIMBP3Q9UFD9 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
RIMBP3Q9UFD9 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC25.2■■□□□ 1.62
RIMBP3Q9UFD9 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
RIMBP3Q9UFD9 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RIMBP3Q9UFD9 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
RIMBP3Q9UFD9 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RIMBP3Q9UFD9 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
RIMBP3Q9UFD9 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RIMBP3Q9UFD9 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RIMBP3Q9UFD9 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC25.19■■□□□ 1.62
RIMBP3Q9UFD9 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC25.19■■□□□ 1.62
RIMBP3Q9UFD9 BX539320.1-201ENST00000623759 877 ntBASIC25.19■■□□□ 1.62
RIMBP3Q9UFD9 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RIMBP3Q9UFD9 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RIMBP3Q9UFD9 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RIMBP3Q9UFD9 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC25.19■■□□□ 1.62
RIMBP3Q9UFD9 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RIMBP3Q9UFD9 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RIMBP3Q9UFD9 MVK-214ENST00000629016 1591 ntTSL 5 BASIC25.19■■□□□ 1.62
RIMBP3Q9UFD9 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC25.19■■□□□ 1.62
RIMBP3Q9UFD9 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RIMBP3Q9UFD9 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC25.19■■□□□ 1.62
RIMBP3Q9UFD9 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RIMBP3Q9UFD9 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RIMBP3Q9UFD9 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RIMBP3Q9UFD9 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RIMBP3Q9UFD9 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC25.19■■□□□ 1.62
RIMBP3Q9UFD9 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC25.19■■□□□ 1.62
RIMBP3Q9UFD9 BRI3P1-201ENST00000440440 378 ntBASIC25.19■■□□□ 1.62
RIMBP3Q9UFD9 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC25.19■■□□□ 1.62
RIMBP3Q9UFD9 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RIMBP3Q9UFD9 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RIMBP3Q9UFD9 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
RIMBP3Q9UFD9 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC25.19■■□□□ 1.62
RIMBP3Q9UFD9 AC233280.19-201ENST00000633223 136 ntBASIC25.19■■□□□ 1.62
RIMBP3Q9UFD9 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC25.18■■□□□ 1.62
RIMBP3Q9UFD9 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC25.18■■□□□ 1.62
RIMBP3Q9UFD9 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
RIMBP3Q9UFD9 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC25.18■■□□□ 1.62
RIMBP3Q9UFD9 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
RIMBP3Q9UFD9 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
RIMBP3Q9UFD9 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC25.18■■□□□ 1.62
RIMBP3Q9UFD9 HIST2H2BB-201ENST00000449108 381 ntBASIC25.18■■□□□ 1.62
RIMBP3Q9UFD9 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC25.18■■□□□ 1.62
RIMBP3Q9UFD9 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC25.18■■□□□ 1.62
RIMBP3Q9UFD9 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC25.18■■□□□ 1.62
RIMBP3Q9UFD9 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC25.18■■□□□ 1.62
RIMBP3Q9UFD9 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC25.18■■□□□ 1.62
RIMBP3Q9UFD9 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
RIMBP3Q9UFD9 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC25.18■■□□□ 1.62
RIMBP3Q9UFD9 AL132780.4-201ENST00000624870 1135 ntBASIC25.18■■□□□ 1.62
RIMBP3Q9UFD9 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC25.18■■□□□ 1.62
RIMBP3Q9UFD9 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC25.18■■□□□ 1.62
RIMBP3Q9UFD9 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
RIMBP3Q9UFD9 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC25.17■■□□□ 1.62
RIMBP3Q9UFD9 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC25.17■■□□□ 1.62
RIMBP3Q9UFD9 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC25.17■■□□□ 1.62
RIMBP3Q9UFD9 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RIMBP3Q9UFD9 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RIMBP3Q9UFD9 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC25.17■■□□□ 1.62
RIMBP3Q9UFD9 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC25.17■■□□□ 1.62
RIMBP3Q9UFD9 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC25.17■■□□□ 1.62
RIMBP3Q9UFD9 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC25.17■■□□□ 1.62
RIMBP3Q9UFD9 AC073150.1-201ENST00000450406 1084 ntBASIC25.17■■□□□ 1.62
RIMBP3Q9UFD9 RN7SL48P-201ENST00000579283 293 ntBASIC25.17■■□□□ 1.62
RIMBP3Q9UFD9 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC25.17■■□□□ 1.62
RIMBP3Q9UFD9 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RIMBP3Q9UFD9 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RIMBP3Q9UFD9 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RIMBP3Q9UFD9 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RIMBP3Q9UFD9 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RIMBP3Q9UFD9 GPAA1P2-202ENST00000606848 1787 ntBASIC25.16■■□□□ 1.62
RIMBP3Q9UFD9 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RIMBP3Q9UFD9 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC25.16■■□□□ 1.62
RIMBP3Q9UFD9 NPPA-201ENST00000376476 728 ntTSL 3 BASIC25.16■■□□□ 1.62
RIMBP3Q9UFD9 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC25.16■■□□□ 1.62
RIMBP3Q9UFD9 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC25.16■■□□□ 1.62
RIMBP3Q9UFD9 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RIMBP3Q9UFD9 IRF3-215ENST00000596822 823 ntTSL 3 BASIC25.16■■□□□ 1.62
RIMBP3Q9UFD9 BNIP3P13-201ENST00000599968 566 ntBASIC25.16■■□□□ 1.62
RIMBP3Q9UFD9 MME-218ENST00000625667 363 ntTSL 5 BASIC25.16■■□□□ 1.62
RIMBP3Q9UFD9 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RIMBP3Q9UFD9 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC25.16■■□□□ 1.62
RIMBP3Q9UFD9 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC25.16■■□□□ 1.62
RIMBP3Q9UFD9 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC25.16■■□□□ 1.62
RIMBP3Q9UFD9 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms