Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CNIH4Q9P003 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
CNIH4Q9P003 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.33■□□□□ 0.05
CNIH4Q9P003 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CNIH4Q9P003 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.33■□□□□ 0.04
CNIH4Q9P003 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CNIH4Q9P003 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNIH4Q9P003 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.33■□□□□ 0.04
CNIH4Q9P003 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNIH4Q9P003 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CNIH4Q9P003 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.33■□□□□ 0.04
CNIH4Q9P003 AL671277.1-201ENST00000429656 993 ntBASIC15.33■□□□□ 0.04
CNIH4Q9P003 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.33■□□□□ 0.04
CNIH4Q9P003 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.33■□□□□ 0.04
CNIH4Q9P003 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.33■□□□□ 0.04
CNIH4Q9P003 SNHG9-202ENST00000564014 471 ntBASIC15.33■□□□□ 0.04
CNIH4Q9P003 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.33■□□□□ 0.04
CNIH4Q9P003 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.33■□□□□ 0.04
CNIH4Q9P003 AP001160.2-201ENST00000596071 487 ntBASIC15.33■□□□□ 0.04
CNIH4Q9P003 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.33■□□□□ 0.04
CNIH4Q9P003 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CNIH4Q9P003 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.33■□□□□ 0.04
CNIH4Q9P003 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNIH4Q9P003 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.33■□□□□ 0.04
CNIH4Q9P003 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.33■□□□□ 0.04
CNIH4Q9P003 AKAP8P1-201ENST00000434743 1349 ntBASIC15.33■□□□□ 0.04
CNIH4Q9P003 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNIH4Q9P003 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.33■□□□□ 0.04
CNIH4Q9P003 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.33■□□□□ 0.04
CNIH4Q9P003 AL671710.1-201ENST00000610245 2349 ntBASIC15.33■□□□□ 0.04
CNIH4Q9P003 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNIH4Q9P003 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNIH4Q9P003 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.33■□□□□ 0.04
CNIH4Q9P003 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
CNIH4Q9P003 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.33■□□□□ 0.04
CNIH4Q9P003 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CNIH4Q9P003 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNIH4Q9P003 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNIH4Q9P003 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CNIH4Q9P003 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNIH4Q9P003 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.33■□□□□ 0.04
CNIH4Q9P003 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CNIH4Q9P003 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.32■□□□□ 0.04
CNIH4Q9P003 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CNIH4Q9P003 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.32■□□□□ 0.04
CNIH4Q9P003 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNIH4Q9P003 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CNIH4Q9P003 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNIH4Q9P003 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.32■□□□□ 0.04
CNIH4Q9P003 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.32■□□□□ 0.04
CNIH4Q9P003 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNIH4Q9P003 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CNIH4Q9P003 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.32■□□□□ 0.04
CNIH4Q9P003 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CNIH4Q9P003 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.32■□□□□ 0.04
CNIH4Q9P003 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNIH4Q9P003 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.32■□□□□ 0.04
CNIH4Q9P003 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNIH4Q9P003 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNIH4Q9P003 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CNIH4Q9P003 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNIH4Q9P003 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CNIH4Q9P003 AL355306.1-201ENST00000415580 579 ntBASIC15.32■□□□□ 0.04
CNIH4Q9P003 RPS8P6-201ENST00000426177 609 ntBASIC15.32■□□□□ 0.04
CNIH4Q9P003 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.32■□□□□ 0.04
CNIH4Q9P003 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.32■□□□□ 0.04
CNIH4Q9P003 DNAJB3-202ENST00000449667 1266 ntBASIC15.32■□□□□ 0.04
CNIH4Q9P003 RN7SL589P-201ENST00000481268 310 ntBASIC15.32■□□□□ 0.04
CNIH4Q9P003 AP000344.2-201ENST00000512987 629 ntBASIC15.32■□□□□ 0.04
CNIH4Q9P003 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.32■□□□□ 0.04
CNIH4Q9P003 RARRES2P8-201ENST00000566335 367 ntBASIC15.32■□□□□ 0.04
CNIH4Q9P003 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.32■□□□□ 0.04
CNIH4Q9P003 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CNIH4Q9P003 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CNIH4Q9P003 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.32■□□□□ 0.04
CNIH4Q9P003 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CNIH4Q9P003 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.32■□□□□ 0.04
CNIH4Q9P003 AL139011.1-202ENST00000642063 584 ntBASIC15.32■□□□□ 0.04
CNIH4Q9P003 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.32■□□□□ 0.04
CNIH4Q9P003 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
CNIH4Q9P003 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNIH4Q9P003 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CNIH4Q9P003 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.32■□□□□ 0.04
CNIH4Q9P003 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNIH4Q9P003 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CNIH4Q9P003 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.32■□□□□ 0.04
CNIH4Q9P003 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNIH4Q9P003 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CNIH4Q9P003 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNIH4Q9P003 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNIH4Q9P003 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CNIH4Q9P003 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.32■□□□□ 0.04
CNIH4Q9P003 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.32■□□□□ 0.04
CNIH4Q9P003 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.32■□□□□ 0.04
CNIH4Q9P003 MTHFR-217ENST00000641820 1569 ntBASIC15.32■□□□□ 0.04
CNIH4Q9P003 AC022188.1-201ENST00000620960 1664 ntBASIC15.32■□□□□ 0.04
CNIH4Q9P003 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CNIH4Q9P003 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.31■□□□□ 0.04
CNIH4Q9P003 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNIH4Q9P003 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms