Protein–RNA interactions for Protein: Q9NP55

BPIFA1, BPI fold-containing family A member 1, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA1Q9NP55 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
BPIFA1Q9NP55 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
BPIFA1Q9NP55 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BPIFA1Q9NP55 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BPIFA1Q9NP55 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BPIFA1Q9NP55 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
BPIFA1Q9NP55 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BPIFA1Q9NP55 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BPIFA1Q9NP55 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BPIFA1Q9NP55 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BPIFA1Q9NP55 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.39■□□□□ 0.21
BPIFA1Q9NP55 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
BPIFA1Q9NP55 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BPIFA1Q9NP55 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.39■□□□□ 0.21
BPIFA1Q9NP55 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
BPIFA1Q9NP55 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BPIFA1Q9NP55 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BPIFA1Q9NP55 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BPIFA1Q9NP55 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
BPIFA1Q9NP55 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BPIFA1Q9NP55 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BPIFA1Q9NP55 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.39■□□□□ 0.21
BPIFA1Q9NP55 AC004461.1-201ENST00000412461 403 ntBASIC16.39■□□□□ 0.21
BPIFA1Q9NP55 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
BPIFA1Q9NP55 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.39■□□□□ 0.21
BPIFA1Q9NP55 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.39■□□□□ 0.21
BPIFA1Q9NP55 AC008267.7-201ENST00000624570 1194 ntBASIC16.39■□□□□ 0.21
BPIFA1Q9NP55 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
BPIFA1Q9NP55 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BPIFA1Q9NP55 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BPIFA1Q9NP55 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BPIFA1Q9NP55 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BPIFA1Q9NP55 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
BPIFA1Q9NP55 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BPIFA1Q9NP55 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 TNRC18P3-201ENST00000441896 2691 ntBASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 AC006449.6-201ENST00000612330 2296 ntBASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 DOC2GP-204ENST00000639052 2548 ntBASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 AC005237.2-201ENST00000434368 219 ntBASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 AC069335.1-201ENST00000489972 472 ntBASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 LINC01225-203ENST00000563550 1244 ntBASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 AL691403.2-201ENST00000618460 490 ntBASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 AL513210.1-201ENST00000629608 234 ntBASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 AC008741.2-201ENST00000612792 3115 ntBASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
BPIFA1Q9NP55 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
BPIFA1Q9NP55 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.37■□□□□ 0.21
BPIFA1Q9NP55 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.37■□□□□ 0.21
BPIFA1Q9NP55 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
BPIFA1Q9NP55 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms