Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHD8Q9HCK8 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
CHD8Q9HCK8 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.88□□□□□ -0.03
CHD8Q9HCK8 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC14.88□□□□□ -0.03
CHD8Q9HCK8 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CHD8Q9HCK8 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.88□□□□□ -0.03
CHD8Q9HCK8 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CHD8Q9HCK8 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CHD8Q9HCK8 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC14.88□□□□□ -0.03
CHD8Q9HCK8 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHD8Q9HCK8 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
CHD8Q9HCK8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC14.88□□□□□ -0.03
CHD8Q9HCK8 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
CHD8Q9HCK8 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CHD8Q9HCK8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHD8Q9HCK8 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC14.88□□□□□ -0.03
CHD8Q9HCK8 AC079178.1-201ENST00000420915 656 ntBASIC14.88□□□□□ -0.03
CHD8Q9HCK8 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.88□□□□□ -0.03
CHD8Q9HCK8 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
CHD8Q9HCK8 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC14.88□□□□□ -0.03
CHD8Q9HCK8 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CHD8Q9HCK8 CYP4F24P-201ENST00000586049 1580 ntBASIC14.88□□□□□ -0.03
CHD8Q9HCK8 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHD8Q9HCK8 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CHD8Q9HCK8 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CHD8Q9HCK8 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHD8Q9HCK8 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHD8Q9HCK8 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHD8Q9HCK8 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CHD8Q9HCK8 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHD8Q9HCK8 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHD8Q9HCK8 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CHD8Q9HCK8 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.87□□□□□ -0.03
CHD8Q9HCK8 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHD8Q9HCK8 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHD8Q9HCK8 POU5F1P6-201ENST00000466990 990 ntBASIC14.87□□□□□ -0.03
CHD8Q9HCK8 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHD8Q9HCK8 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.87□□□□□ -0.03
CHD8Q9HCK8 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.87□□□□□ -0.03
CHD8Q9HCK8 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.87□□□□□ -0.03
CHD8Q9HCK8 AC006453.4-201ENST00000636949 1252 ntBASIC14.87□□□□□ -0.03
CHD8Q9HCK8 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHD8Q9HCK8 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHD8Q9HCK8 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CHD8Q9HCK8 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.87□□□□□ -0.03
CHD8Q9HCK8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CHD8Q9HCK8 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.87□□□□□ -0.03
CHD8Q9HCK8 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.87□□□□□ -0.03
CHD8Q9HCK8 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
CHD8Q9HCK8 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHD8Q9HCK8 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.87□□□□□ -0.03
CHD8Q9HCK8 AC079112.1-201ENST00000454972 939 ntBASIC14.87□□□□□ -0.03
CHD8Q9HCK8 AC010234.1-201ENST00000494599 870 ntBASIC14.87□□□□□ -0.03
CHD8Q9HCK8 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHD8Q9HCK8 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHD8Q9HCK8 AC027139.1-201ENST00000565286 951 ntBASIC14.87□□□□□ -0.03
CHD8Q9HCK8 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.87□□□□□ -0.03
CHD8Q9HCK8 PRSS30P-206ENST00000641773 873 ntBASIC14.87□□□□□ -0.03
CHD8Q9HCK8 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHD8Q9HCK8 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHD8Q9HCK8 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.87□□□□□ -0.03
CHD8Q9HCK8 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHD8Q9HCK8 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHD8Q9HCK8 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHD8Q9HCK8 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CHD8Q9HCK8 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHD8Q9HCK8 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC14.87□□□□□ -0.03
CHD8Q9HCK8 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHD8Q9HCK8 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CHD8Q9HCK8 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CHD8Q9HCK8 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.86□□□□□ -0.03
CHD8Q9HCK8 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHD8Q9HCK8 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHD8Q9HCK8 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHD8Q9HCK8 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CHD8Q9HCK8 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.86□□□□□ -0.03
CHD8Q9HCK8 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.86□□□□□ -0.03
CHD8Q9HCK8 AC078991.1-201ENST00000437297 610 ntBASIC14.86□□□□□ -0.03
CHD8Q9HCK8 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.86□□□□□ -0.03
CHD8Q9HCK8 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CHD8Q9HCK8 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.86□□□□□ -0.03
CHD8Q9HCK8 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHD8Q9HCK8 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHD8Q9HCK8 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHD8Q9HCK8 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC14.86□□□□□ -0.03
CHD8Q9HCK8 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.86□□□□□ -0.03
CHD8Q9HCK8 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHD8Q9HCK8 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHD8Q9HCK8 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHD8Q9HCK8 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.86□□□□□ -0.03
CHD8Q9HCK8 AL138709.1-201ENST00000614840 1693 ntBASIC14.86□□□□□ -0.03
CHD8Q9HCK8 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHD8Q9HCK8 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHD8Q9HCK8 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHD8Q9HCK8 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.86□□□□□ -0.03
CHD8Q9HCK8 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.86□□□□□ -0.03
CHD8Q9HCK8 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.86□□□□□ -0.03
CHD8Q9HCK8 AC013355.1-201ENST00000562625 723 ntBASIC14.86□□□□□ -0.03
CHD8Q9HCK8 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.86□□□□□ -0.03
CHD8Q9HCK8 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms