Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF41Q9H4P4 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RNF41Q9H4P4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RNF41Q9H4P4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF41Q9H4P4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF41Q9H4P4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF41Q9H4P4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF41Q9H4P4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC19.21■□□□□ 0.67
RNF41Q9H4P4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF41Q9H4P4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF41Q9H4P4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
RNF41Q9H4P4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF41Q9H4P4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF41Q9H4P4 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF41Q9H4P4 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RNF41Q9H4P4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RNF41Q9H4P4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RNF41Q9H4P4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RNF41Q9H4P4 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF41Q9H4P4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF41Q9H4P4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF41Q9H4P4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF41Q9H4P4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.21■□□□□ 0.67
RNF41Q9H4P4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.21■□□□□ 0.67
RNF41Q9H4P4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF41Q9H4P4 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
RNF41Q9H4P4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.21■□□□□ 0.67
RNF41Q9H4P4 MIR4453-201ENST00000584019 89 ntBASIC19.21■□□□□ 0.67
RNF41Q9H4P4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF41Q9H4P4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF41Q9H4P4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.21■□□□□ 0.67
RNF41Q9H4P4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF41Q9H4P4 TUBB3P1-201ENST00000405796 1332 ntBASIC19.21■□□□□ 0.67
RNF41Q9H4P4 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF41Q9H4P4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.21■□□□□ 0.67
RNF41Q9H4P4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF41Q9H4P4 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF41Q9H4P4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RNF41Q9H4P4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF41Q9H4P4 AL035456.1-201ENST00000456064 1369 ntBASIC19.2■□□□□ 0.66
RNF41Q9H4P4 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF41Q9H4P4 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF41Q9H4P4 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF41Q9H4P4 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RNF41Q9H4P4 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF41Q9H4P4 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF41Q9H4P4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF41Q9H4P4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF41Q9H4P4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF41Q9H4P4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF41Q9H4P4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC19.2■□□□□ 0.66
RNF41Q9H4P4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF41Q9H4P4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF41Q9H4P4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF41Q9H4P4 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.2■□□□□ 0.66
RNF41Q9H4P4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF41Q9H4P4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.2■□□□□ 0.66
RNF41Q9H4P4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.2■□□□□ 0.66
RNF41Q9H4P4 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF41Q9H4P4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.2■□□□□ 0.66
RNF41Q9H4P4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.2■□□□□ 0.66
RNF41Q9H4P4 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.2■□□□□ 0.66
RNF41Q9H4P4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF41Q9H4P4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF41Q9H4P4 AL662844.4-201ENST00000606367 2838 ntBASIC19.2■□□□□ 0.66
RNF41Q9H4P4 AC079328.2-201ENST00000561241 3354 ntBASIC19.2■□□□□ 0.66
RNF41Q9H4P4 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.2■□□□□ 0.66
RNF41Q9H4P4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF41Q9H4P4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF41Q9H4P4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RNF41Q9H4P4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RNF41Q9H4P4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RNF41Q9H4P4 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF41Q9H4P4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.2■□□□□ 0.66
RNF41Q9H4P4 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RNF41Q9H4P4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF41Q9H4P4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
RNF41Q9H4P4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF41Q9H4P4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF41Q9H4P4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RNF41Q9H4P4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF41Q9H4P4 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RNF41Q9H4P4 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF41Q9H4P4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF41Q9H4P4 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF41Q9H4P4 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RNF41Q9H4P4 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF41Q9H4P4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF41Q9H4P4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF41Q9H4P4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF41Q9H4P4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF41Q9H4P4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.19■□□□□ 0.66
RNF41Q9H4P4 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.19■□□□□ 0.66
RNF41Q9H4P4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF41Q9H4P4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.19■□□□□ 0.66
RNF41Q9H4P4 NAA38-207ENST00000576861 556 ntTSL 3 BASIC19.19■□□□□ 0.66
RNF41Q9H4P4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF41Q9H4P4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.19■□□□□ 0.66
RNF41Q9H4P4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF41Q9H4P4 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms