Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.55■□□□□ 0.4
NXF3Q9H4D5 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.55■□□□□ 0.4
NXF3Q9H4D5 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.55■□□□□ 0.4
NXF3Q9H4D5 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.55■□□□□ 0.4
NXF3Q9H4D5 AL033527.5-202ENST00000641632 1098 ntBASIC17.55■□□□□ 0.4
NXF3Q9H4D5 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NXF3Q9H4D5 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NXF3Q9H4D5 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NXF3Q9H4D5 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.54■□□□□ 0.4
NXF3Q9H4D5 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.54■□□□□ 0.4
NXF3Q9H4D5 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NXF3Q9H4D5 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NXF3Q9H4D5 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NXF3Q9H4D5 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NXF3Q9H4D5 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.54■□□□□ 0.4
NXF3Q9H4D5 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NXF3Q9H4D5 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NXF3Q9H4D5 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.54■□□□□ 0.4
NXF3Q9H4D5 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NXF3Q9H4D5 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NXF3Q9H4D5 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NXF3Q9H4D5 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NXF3Q9H4D5 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NXF3Q9H4D5 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NXF3Q9H4D5 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NXF3Q9H4D5 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NXF3Q9H4D5 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
NXF3Q9H4D5 SERBP1P3-201ENST00000459980 809 ntBASIC17.54■□□□□ 0.4
NXF3Q9H4D5 ZNF890P-202ENST00000530367 1156 ntBASIC17.54■□□□□ 0.4
NXF3Q9H4D5 AC104794.3-201ENST00000566840 1248 ntBASIC17.54■□□□□ 0.4
NXF3Q9H4D5 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.54■□□□□ 0.4
NXF3Q9H4D5 AC004233.3-201ENST00000607794 1269 ntBASIC17.54■□□□□ 0.4
NXF3Q9H4D5 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.54■□□□□ 0.4
NXF3Q9H4D5 AC004790.1-201ENST00000612686 536 ntBASIC17.54■□□□□ 0.4
NXF3Q9H4D5 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NXF3Q9H4D5 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
NXF3Q9H4D5 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NXF3Q9H4D5 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.54■□□□□ 0.4
NXF3Q9H4D5 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NXF3Q9H4D5 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.54■□□□□ 0.4
NXF3Q9H4D5 NKILA-202ENST00000614771 2598 ntBASIC17.54■□□□□ 0.4
NXF3Q9H4D5 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NXF3Q9H4D5 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NXF3Q9H4D5 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NXF3Q9H4D5 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NXF3Q9H4D5 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.54■□□□□ 0.4
NXF3Q9H4D5 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.54■□□□□ 0.4
NXF3Q9H4D5 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NXF3Q9H4D5 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.53■□□□□ 0.4
NXF3Q9H4D5 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NXF3Q9H4D5 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.53■□□□□ 0.4
NXF3Q9H4D5 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NXF3Q9H4D5 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NXF3Q9H4D5 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.53■□□□□ 0.4
NXF3Q9H4D5 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.53■□□□□ 0.4
NXF3Q9H4D5 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
NXF3Q9H4D5 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NXF3Q9H4D5 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NXF3Q9H4D5 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.53■□□□□ 0.4
NXF3Q9H4D5 SPDYE18-201ENST00000510091 1050 ntBASIC17.53■□□□□ 0.4
NXF3Q9H4D5 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.53■□□□□ 0.4
NXF3Q9H4D5 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.53■□□□□ 0.4
NXF3Q9H4D5 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NXF3Q9H4D5 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.53■□□□□ 0.4
NXF3Q9H4D5 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NXF3Q9H4D5 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NXF3Q9H4D5 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NXF3Q9H4D5 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NXF3Q9H4D5 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NXF3Q9H4D5 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NXF3Q9H4D5 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
NXF3Q9H4D5 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NXF3Q9H4D5 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NXF3Q9H4D5 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NXF3Q9H4D5 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.53■□□□□ 0.4
NXF3Q9H4D5 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NXF3Q9H4D5 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms