Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH11YQ9BZA8 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
PCDH11YQ9BZA8 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PCDH11YQ9BZA8 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC20.91■□□□□ 0.94
PCDH11YQ9BZA8 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC20.91■□□□□ 0.94
PCDH11YQ9BZA8 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC20.91■□□□□ 0.94
PCDH11YQ9BZA8 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
PCDH11YQ9BZA8 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC20.91■□□□□ 0.94
PCDH11YQ9BZA8 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC20.91■□□□□ 0.94
PCDH11YQ9BZA8 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH11YQ9BZA8 TECR-220ENST00000600083 1204 ntTSL 2 BASIC20.91■□□□□ 0.94
PCDH11YQ9BZA8 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH11YQ9BZA8 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH11YQ9BZA8 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH11YQ9BZA8 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
PCDH11YQ9BZA8 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PCDH11YQ9BZA8 INTS4P2-202ENST00000614726 2019 ntBASIC20.91■□□□□ 0.94
PCDH11YQ9BZA8 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH11YQ9BZA8 AC093525.8-201ENST00000624099 1342 ntBASIC20.91■□□□□ 0.94
PCDH11YQ9BZA8 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
PCDH11YQ9BZA8 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH11YQ9BZA8 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH11YQ9BZA8 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH11YQ9BZA8 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH11YQ9BZA8 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH11YQ9BZA8 AC078925.2-201ENST00000624013 1973 ntBASIC20.9■□□□□ 0.94
PCDH11YQ9BZA8 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH11YQ9BZA8 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDH11YQ9BZA8 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDH11YQ9BZA8 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH11YQ9BZA8 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDH11YQ9BZA8 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH11YQ9BZA8 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH11YQ9BZA8 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
PCDH11YQ9BZA8 AC099336.1-201ENST00000417053 1171 ntBASIC20.9■□□□□ 0.94
PCDH11YQ9BZA8 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC20.9■□□□□ 0.94
PCDH11YQ9BZA8 ACTBP11-201ENST00000436287 1126 ntBASIC20.9■□□□□ 0.94
PCDH11YQ9BZA8 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDH11YQ9BZA8 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC20.9■□□□□ 0.94
PCDH11YQ9BZA8 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC20.9■□□□□ 0.94
PCDH11YQ9BZA8 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
PCDH11YQ9BZA8 AL583810.1-201ENST00000553344 1045 ntBASIC20.9■□□□□ 0.94
PCDH11YQ9BZA8 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC20.9■□□□□ 0.94
PCDH11YQ9BZA8 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH11YQ9BZA8 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDH11YQ9BZA8 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDH11YQ9BZA8 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
PCDH11YQ9BZA8 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDH11YQ9BZA8 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDH11YQ9BZA8 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH11YQ9BZA8 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH11YQ9BZA8 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
PCDH11YQ9BZA8 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
PCDH11YQ9BZA8 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH11YQ9BZA8 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH11YQ9BZA8 AC005229.1-201ENST00000392885 409 ntBASIC20.89■□□□□ 0.93
PCDH11YQ9BZA8 TOMM22P5-201ENST00000416399 439 ntBASIC20.89■□□□□ 0.93
PCDH11YQ9BZA8 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC20.89■□□□□ 0.93
PCDH11YQ9BZA8 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
PCDH11YQ9BZA8 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC20.89■□□□□ 0.93
PCDH11YQ9BZA8 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
PCDH11YQ9BZA8 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH11YQ9BZA8 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC20.89■□□□□ 0.93
PCDH11YQ9BZA8 AC068587.3-201ENST00000526613 355 ntBASIC20.89■□□□□ 0.93
PCDH11YQ9BZA8 FAM8A2P-201ENST00000528813 1142 ntBASIC20.89■□□□□ 0.93
PCDH11YQ9BZA8 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC20.89■□□□□ 0.93
PCDH11YQ9BZA8 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC20.89■□□□□ 0.93
PCDH11YQ9BZA8 MIR4538-201ENST00000581377 78 ntBASIC20.89■□□□□ 0.93
PCDH11YQ9BZA8 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC20.89■□□□□ 0.93
PCDH11YQ9BZA8 PCDHB18P-201ENST00000524813 2368 ntBASIC20.89■□□□□ 0.93
PCDH11YQ9BZA8 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.89■□□□□ 0.93
PCDH11YQ9BZA8 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH11YQ9BZA8 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH11YQ9BZA8 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.89■□□□□ 0.93
PCDH11YQ9BZA8 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH11YQ9BZA8 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.89■□□□□ 0.93
PCDH11YQ9BZA8 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH11YQ9BZA8 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
PCDH11YQ9BZA8 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH11YQ9BZA8 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH11YQ9BZA8 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PCDH11YQ9BZA8 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH11YQ9BZA8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH11YQ9BZA8 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC20.89■□□□□ 0.93
PCDH11YQ9BZA8 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH11YQ9BZA8 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDH11YQ9BZA8 BNIP3P1-202ENST00000550043 1585 ntBASIC20.88■□□□□ 0.93
PCDH11YQ9BZA8 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH11YQ9BZA8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH11YQ9BZA8 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH11YQ9BZA8 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH11YQ9BZA8 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PCDH11YQ9BZA8 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH11YQ9BZA8 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH11YQ9BZA8 SOCS2P1-201ENST00000417727 557 ntBASIC20.88■□□□□ 0.93
PCDH11YQ9BZA8 USB1-202ENST00000423271 1217 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDH11YQ9BZA8 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH11YQ9BZA8 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH11YQ9BZA8 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDH11YQ9BZA8 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms