Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AL162727.3-201ENST00000635661 2787 ntBASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 AC069262.1-201ENST00000539058 672 ntBASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 AC015911.4-201ENST00000588022 1070 ntBASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 MIR6080-201ENST00000617359 66 ntBASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 GPAA1P2-202ENST00000606848 1787 ntBASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 AC106886.4-201ENST00000623557 2502 ntBASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 AL031731.1-201ENST00000642131 2094 ntBASIC13.67□□□□□ -0.22
SSBP3Q9BWW4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 AC142381.1-201ENST00000426099 345 ntBASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 SPDYE14P-201ENST00000442619 822 ntBASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SSBP3Q9BWW4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SSBP3Q9BWW4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms