Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 DFFB-203ENST00000341385 572 ntTSL 5 BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 LAGE3P1-201ENST00000425356 484 ntBASIC9.82□□□□□ -0.84
LIMD2Q9BT23 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 AL353135.1-201ENST00000606729 504 ntBASIC9.82□□□□□ -0.84
LIMD2Q9BT23 AL732292.2-201ENST00000609649 430 ntBASIC9.82□□□□□ -0.84
LIMD2Q9BT23 MIR1199-201ENST00000621445 119 ntBASIC9.82□□□□□ -0.84
LIMD2Q9BT23 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 AF228730.7-201ENST00000641842 219 ntBASIC9.82□□□□□ -0.84
LIMD2Q9BT23 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 DBET-201ENST00000630918 3363 ntBASIC9.82□□□□□ -0.84
LIMD2Q9BT23 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 AL009178.2-201ENST00000597278 2719 ntBASIC9.82□□□□□ -0.84
LIMD2Q9BT23 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 CICP13-201ENST00000422015 2789 ntBASIC9.81□□□□□ -0.84
LIMD2Q9BT23 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 RAB17-203ENST00000409576 466 ntTSL 3 BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 METTL23-204ENST00000586752 904 ntTSL 2 BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 AP001350.2-201ENST00000625104 1094 ntBASIC9.81□□□□□ -0.84
LIMD2Q9BT23 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LIMD2Q9BT23 CICP14-201ENST00000629111 2732 ntBASIC9.81□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms