Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CCL13Q99616 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.7□□□□□ -0.22
CCL13Q99616 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL13Q99616 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL13Q99616 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.7□□□□□ -0.22
CCL13Q99616 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.7□□□□□ -0.22
CCL13Q99616 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL13Q99616 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CCL13Q99616 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL13Q99616 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL13Q99616 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CCL13Q99616 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
CCL13Q99616 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.7□□□□□ -0.22
CCL13Q99616 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CCL13Q99616 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL13Q99616 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL13Q99616 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL13Q99616 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL13Q99616 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
CCL13Q99616 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL13Q99616 AC254562.1-201ENST00000417586 456 ntBASIC13.7□□□□□ -0.22
CCL13Q99616 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CCL13Q99616 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.7□□□□□ -0.22
CCL13Q99616 AP006288.1-201ENST00000446065 395 ntBASIC13.7□□□□□ -0.22
CCL13Q99616 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.7□□□□□ -0.22
CCL13Q99616 AC069335.1-201ENST00000489972 472 ntBASIC13.7□□□□□ -0.22
CCL13Q99616 AC105233.2-201ENST00000523697 349 ntBASIC13.7□□□□□ -0.22
CCL13Q99616 AF228730.5-201ENST00000530288 346 ntBASIC13.7□□□□□ -0.22
CCL13Q99616 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.7□□□□□ -0.22
CCL13Q99616 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.7□□□□□ -0.22
CCL13Q99616 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.7□□□□□ -0.22
CCL13Q99616 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CCL13Q99616 LINC01225-203ENST00000563550 1244 ntBASIC13.7□□□□□ -0.22
CCL13Q99616 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.7□□□□□ -0.22
CCL13Q99616 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
CCL13Q99616 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL13Q99616 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CCL13Q99616 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL13Q99616 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL13Q99616 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL13Q99616 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CCL13Q99616 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL13Q99616 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CCL13Q99616 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL13Q99616 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CCL13Q99616 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL13Q99616 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL13Q99616 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.7□□□□□ -0.22
CCL13Q99616 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.7□□□□□ -0.22
CCL13Q99616 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL13Q99616 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL13Q99616 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCL13Q99616 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL13Q99616 AC124067.4-201ENST00000519691 2379 ntBASIC13.69□□□□□ -0.22
CCL13Q99616 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL13Q99616 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL13Q99616 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL13Q99616 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
CCL13Q99616 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CCL13Q99616 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL13Q99616 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL13Q99616 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL13Q99616 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL13Q99616 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL13Q99616 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL13Q99616 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCL13Q99616 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL13Q99616 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.69□□□□□ -0.22
CCL13Q99616 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CCL13Q99616 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL13Q99616 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL13Q99616 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.69□□□□□ -0.22
CCL13Q99616 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CCL13Q99616 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.69□□□□□ -0.22
CCL13Q99616 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL13Q99616 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCL13Q99616 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.69□□□□□ -0.22
CCL13Q99616 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCL13Q99616 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.69□□□□□ -0.22
CCL13Q99616 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL13Q99616 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.69□□□□□ -0.22
CCL13Q99616 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.69□□□□□ -0.22
CCL13Q99616 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCL13Q99616 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CCL13Q99616 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.69□□□□□ -0.22
CCL13Q99616 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CCL13Q99616 KRT8P23-201ENST00000560090 1207 ntBASIC13.69□□□□□ -0.22
CCL13Q99616 AP000842.3-202ENST00000569238 1080 ntBASIC13.69□□□□□ -0.22
CCL13Q99616 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL13Q99616 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.69□□□□□ -0.22
CCL13Q99616 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.69□□□□□ -0.22
CCL13Q99616 AC006538.3-201ENST00000612495 578 ntBASIC13.69□□□□□ -0.22
CCL13Q99616 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL13Q99616 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.69□□□□□ -0.22
CCL13Q99616 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL13Q99616 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL13Q99616 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL13Q99616 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCL13Q99616 REXO1L8P-201ENST00000604378 1897 ntBASIC13.69□□□□□ -0.22
CCL13Q99616 U82695.1-201ENST00000635752 1889 ntBASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms