Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.93■□□□□ 0.62
CDK5RAP2Q96SN8 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDK5RAP2Q96SN8 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDK5RAP2Q96SN8 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDK5RAP2Q96SN8 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 INE1-201ENST00000456273 945 ntBASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 AL512384.1-201ENST00000406683 331 ntBASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 AC007541.1-201ENST00000570282 1469 ntBASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CDK5RAP2Q96SN8 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.91■□□□□ 0.62
CDK5RAP2Q96SN8 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDK5RAP2Q96SN8 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDK5RAP2Q96SN8 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.91■□□□□ 0.62
CDK5RAP2Q96SN8 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.91■□□□□ 0.62
CDK5RAP2Q96SN8 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.91■□□□□ 0.62
CDK5RAP2Q96SN8 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDK5RAP2Q96SN8 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.91■□□□□ 0.62
CDK5RAP2Q96SN8 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDK5RAP2Q96SN8 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDK5RAP2Q96SN8 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDK5RAP2Q96SN8 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CDK5RAP2Q96SN8 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.91■□□□□ 0.62
CDK5RAP2Q96SN8 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CDK5RAP2Q96SN8 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDK5RAP2Q96SN8 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.91■□□□□ 0.62
CDK5RAP2Q96SN8 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.91■□□□□ 0.62
CDK5RAP2Q96SN8 SLED1-202ENST00000512051 380 ntBASIC18.91■□□□□ 0.62
CDK5RAP2Q96SN8 AC124283.3-201ENST00000570869 594 ntBASIC18.91■□□□□ 0.62
CDK5RAP2Q96SN8 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDK5RAP2Q96SN8 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDK5RAP2Q96SN8 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.91■□□□□ 0.62
CDK5RAP2Q96SN8 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDK5RAP2Q96SN8 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDK5RAP2Q96SN8 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CDK5RAP2Q96SN8 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CDK5RAP2Q96SN8 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.91■□□□□ 0.62
CDK5RAP2Q96SN8 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.91■□□□□ 0.62
CDK5RAP2Q96SN8 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDK5RAP2Q96SN8 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 RPL13P2-201ENST00000440687 659 ntBASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 AC036164.1-201ENST00000570544 333 ntBASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 GNRHR2-203ENST00000581100 1187 ntBASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 AC092364.2-201ENST00000596710 2692 ntBASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.9■□□□□ 0.62
CDK5RAP2Q96SN8 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms