Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CFAP53Q96M91 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC21.78■■□□□ 1.08
CFAP53Q96M91 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CFAP53Q96M91 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP53Q96M91 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP53Q96M91 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP53Q96M91 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP53Q96M91 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC21.78■■□□□ 1.08
CFAP53Q96M91 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CFAP53Q96M91 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.78■■□□□ 1.08
CFAP53Q96M91 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP53Q96M91 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
CFAP53Q96M91 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CFAP53Q96M91 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CFAP53Q96M91 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC21.77■■□□□ 1.08
CFAP53Q96M91 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CFAP53Q96M91 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC21.77■■□□□ 1.08
CFAP53Q96M91 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC21.77■■□□□ 1.08
CFAP53Q96M91 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC21.77■■□□□ 1.08
CFAP53Q96M91 AC006449.6-201ENST00000612330 2296 ntBASIC21.77■■□□□ 1.08
CFAP53Q96M91 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CFAP53Q96M91 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CFAP53Q96M91 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CFAP53Q96M91 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CFAP53Q96M91 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CFAP53Q96M91 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC21.77■■□□□ 1.08
CFAP53Q96M91 MTND6P24-201ENST00000440466 518 ntBASIC21.77■■□□□ 1.08
CFAP53Q96M91 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CFAP53Q96M91 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC21.77■■□□□ 1.08
CFAP53Q96M91 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC21.77■■□□□ 1.08
CFAP53Q96M91 BANF1P1-201ENST00000553684 263 ntBASIC21.77■■□□□ 1.08
CFAP53Q96M91 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CFAP53Q96M91 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC21.77■■□□□ 1.08
CFAP53Q96M91 PAM16-215ENST00000577031 548 ntTSL 4 BASIC21.77■■□□□ 1.08
CFAP53Q96M91 AL355385.1-201ENST00000606123 409 ntBASIC21.77■■□□□ 1.08
CFAP53Q96M91 RN7SL828P-201ENST00000607615 303 ntBASIC21.77■■□□□ 1.08
CFAP53Q96M91 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CFAP53Q96M91 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CFAP53Q96M91 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CFAP53Q96M91 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC21.77■■□□□ 1.08
CFAP53Q96M91 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC21.77■■□□□ 1.08
CFAP53Q96M91 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC21.76■■□□□ 1.07
CFAP53Q96M91 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CFAP53Q96M91 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CFAP53Q96M91 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CFAP53Q96M91 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CFAP53Q96M91 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
CFAP53Q96M91 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CFAP53Q96M91 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CFAP53Q96M91 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CFAP53Q96M91 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
CFAP53Q96M91 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC21.76■■□□□ 1.07
CFAP53Q96M91 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC21.76■■□□□ 1.07
CFAP53Q96M91 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CFAP53Q96M91 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CFAP53Q96M91 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC21.76■■□□□ 1.07
CFAP53Q96M91 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CFAP53Q96M91 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CFAP53Q96M91 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CFAP53Q96M91 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
CFAP53Q96M91 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CFAP53Q96M91 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC21.76■■□□□ 1.07
CFAP53Q96M91 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC21.76■■□□□ 1.07
CFAP53Q96M91 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CFAP53Q96M91 AL158211.3-201ENST00000607385 239 ntBASIC21.76■■□□□ 1.07
CFAP53Q96M91 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CFAP53Q96M91 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CFAP53Q96M91 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CFAP53Q96M91 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CFAP53Q96M91 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC21.76■■□□□ 1.07
CFAP53Q96M91 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CFAP53Q96M91 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CFAP53Q96M91 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC21.76■■□□□ 1.07
CFAP53Q96M91 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC21.76■■□□□ 1.07
CFAP53Q96M91 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CFAP53Q96M91 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC21.76■■□□□ 1.07
CFAP53Q96M91 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CFAP53Q96M91 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP53Q96M91 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP53Q96M91 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CFAP53Q96M91 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP53Q96M91 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP53Q96M91 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC21.75■■□□□ 1.07
CFAP53Q96M91 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP53Q96M91 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP53Q96M91 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CFAP53Q96M91 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CFAP53Q96M91 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP53Q96M91 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP53Q96M91 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP53Q96M91 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC21.75■■□□□ 1.07
CFAP53Q96M91 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CFAP53Q96M91 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC21.75■■□□□ 1.07
CFAP53Q96M91 TREML5P-201ENST00000421694 576 ntBASIC21.75■■□□□ 1.07
CFAP53Q96M91 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP53Q96M91 SATB1-217ENST00000493952 626 ntTSL 3 BASIC21.75■■□□□ 1.07
CFAP53Q96M91 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP53Q96M91 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP53Q96M91 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP53Q96M91 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms