Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 UGT1A2P-201ENST00000454886 866 ntBASIC17.57■□□□□ 0.4
SNX27Q96L92 AC004890.2-204ENST00000481968 304 ntBASIC17.57■□□□□ 0.4
SNX27Q96L92 AC092658.1-201ENST00000505836 891 ntBASIC17.57■□□□□ 0.4
SNX27Q96L92 AL079307.3-201ENST00000556114 283 ntBASIC17.57■□□□□ 0.4
SNX27Q96L92 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SNX27Q96L92 AC026979.3-201ENST00000607315 403 ntBASIC17.57■□□□□ 0.4
SNX27Q96L92 MIR6727-201ENST00000620702 65 ntBASIC17.57■□□□□ 0.4
SNX27Q96L92 AC008761.3-201ENST00000624803 892 ntBASIC17.57■□□□□ 0.4
SNX27Q96L92 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SNX27Q96L92 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX27Q96L92 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.57■□□□□ 0.4
SNX27Q96L92 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX27Q96L92 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX27Q96L92 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SNX27Q96L92 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.57■□□□□ 0.4
SNX27Q96L92 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.57■□□□□ 0.4
SNX27Q96L92 AC124067.4-201ENST00000519691 2379 ntBASIC17.57■□□□□ 0.4
SNX27Q96L92 AC009053.2-201ENST00000563701 2365 ntBASIC17.57■□□□□ 0.4
SNX27Q96L92 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX27Q96L92 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SNX27Q96L92 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.57■□□□□ 0.4
SNX27Q96L92 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX27Q96L92 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SNX27Q96L92 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
SNX27Q96L92 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX27Q96L92 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX27Q96L92 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX27Q96L92 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX27Q96L92 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX27Q96L92 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.56■□□□□ 0.4
SNX27Q96L92 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
SNX27Q96L92 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX27Q96L92 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.56■□□□□ 0.4
SNX27Q96L92 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX27Q96L92 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.56■□□□□ 0.4
SNX27Q96L92 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX27Q96L92 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX27Q96L92 CRB3P1-201ENST00000449338 276 ntBASIC17.56■□□□□ 0.4
SNX27Q96L92 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.56■□□□□ 0.4
SNX27Q96L92 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SNX27Q96L92 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX27Q96L92 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
SNX27Q96L92 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX27Q96L92 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX27Q96L92 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX27Q96L92 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.56■□□□□ 0.4
SNX27Q96L92 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX27Q96L92 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.56■□□□□ 0.4
SNX27Q96L92 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.56■□□□□ 0.4
SNX27Q96L92 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SNX27Q96L92 REXO1L8P-201ENST00000604378 1897 ntBASIC17.56■□□□□ 0.4
SNX27Q96L92 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX27Q96L92 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SNX27Q96L92 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX27Q96L92 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.56■□□□□ 0.4
SNX27Q96L92 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNX27Q96L92 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SNX27Q96L92 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX27Q96L92 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX27Q96L92 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNX27Q96L92 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNX27Q96L92 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX27Q96L92 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.55■□□□□ 0.4
SNX27Q96L92 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX27Q96L92 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNX27Q96L92 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX27Q96L92 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNX27Q96L92 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX27Q96L92 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNX27Q96L92 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNX27Q96L92 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNX27Q96L92 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNX27Q96L92 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SNX27Q96L92 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX27Q96L92 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SNX27Q96L92 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNX27Q96L92 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX27Q96L92 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX27Q96L92 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.55■□□□□ 0.4
SNX27Q96L92 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.55■□□□□ 0.4
SNX27Q96L92 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNX27Q96L92 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SNX27Q96L92 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.55■□□□□ 0.4
SNX27Q96L92 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.55■□□□□ 0.4
SNX27Q96L92 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.55■□□□□ 0.4
SNX27Q96L92 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.55■□□□□ 0.4
SNX27Q96L92 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.55■□□□□ 0.4
SNX27Q96L92 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.55■□□□□ 0.4
SNX27Q96L92 AL596325.1-201ENST00000563991 1082 ntBASIC17.55■□□□□ 0.4
SNX27Q96L92 MIR4525-201ENST00000580000 75 ntBASIC17.55■□□□□ 0.4
SNX27Q96L92 LINC02560-201ENST00000596379 459 ntBASIC17.55■□□□□ 0.4
SNX27Q96L92 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.55■□□□□ 0.4
SNX27Q96L92 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SNX27Q96L92 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX27Q96L92 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX27Q96L92 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX27Q96L92 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNX27Q96L92 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
SNX27Q96L92 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNX27Q96L92 AL513477.1-201ENST00000602865 2407 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms