Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP6V0A1Q93050 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATP6V0A1Q93050 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP6V0A1Q93050 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP6V0A1Q93050 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP6V0A1Q93050 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATP6V0A1Q93050 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.23■□□□□ 0.51
ATP6V0A1Q93050 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.23■□□□□ 0.51
ATP6V0A1Q93050 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
ATP6V0A1Q93050 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
ATP6V0A1Q93050 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATP6V0A1Q93050 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.23■□□□□ 0.51
ATP6V0A1Q93050 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.23■□□□□ 0.51
ATP6V0A1Q93050 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.23■□□□□ 0.51
ATP6V0A1Q93050 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
ATP6V0A1Q93050 AC105021.1-202ENST00000570572 669 ntBASIC18.23■□□□□ 0.51
ATP6V0A1Q93050 AC061975.2-201ENST00000581722 295 ntBASIC18.23■□□□□ 0.51
ATP6V0A1Q93050 AL365330.1-201ENST00000607459 531 ntBASIC18.23■□□□□ 0.51
ATP6V0A1Q93050 TEX28P1-201ENST00000613479 1221 ntBASIC18.23■□□□□ 0.51
ATP6V0A1Q93050 TEX28P2-201ENST00000617764 1221 ntBASIC18.23■□□□□ 0.51
ATP6V0A1Q93050 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATP6V0A1Q93050 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP6V0A1Q93050 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP6V0A1Q93050 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP6V0A1Q93050 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
ATP6V0A1Q93050 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP6V0A1Q93050 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP6V0A1Q93050 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.23■□□□□ 0.51
ATP6V0A1Q93050 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP6V0A1Q93050 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP6V0A1Q93050 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP6V0A1Q93050 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.23■□□□□ 0.51
ATP6V0A1Q93050 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
ATP6V0A1Q93050 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.23■□□□□ 0.51
ATP6V0A1Q93050 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 GAPDHP21-201ENST00000450301 1010 ntBASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 AL662799.1-202ENST00000614205 422 ntBASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 ME2P1-201ENST00000426028 1970 ntBASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATP6V0A1Q93050 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP6V0A1Q93050 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.21■□□□□ 0.51
ATP6V0A1Q93050 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.21■□□□□ 0.51
ATP6V0A1Q93050 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP6V0A1Q93050 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
ATP6V0A1Q93050 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
ATP6V0A1Q93050 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP6V0A1Q93050 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
ATP6V0A1Q93050 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP6V0A1Q93050 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
ATP6V0A1Q93050 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.21■□□□□ 0.51
ATP6V0A1Q93050 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ATP6V0A1Q93050 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ATP6V0A1Q93050 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP6V0A1Q93050 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP6V0A1Q93050 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ATP6V0A1Q93050 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
ATP6V0A1Q93050 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms