Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 AL133499.1-201ENST00000596207 608 ntBASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 AC138649.2-201ENST00000615886 705 ntBASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 SERPINA13P-202ENST00000478994 924 ntBASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 MBP-227ENST00000526111 581 ntTSL 4 BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 AC107373.2-201ENST00000607735 490 ntBASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 AC092068.3-201ENST00000587894 2016 ntBASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC10.77□□□□□ -0.69
ALMS1Q8TCU4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 LINC02012-201ENST00000608206 1725 ntBASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 KRTAP10-13P-201ENST00000412914 571 ntBASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 ACTG1P2-201ENST00000415776 1125 ntBASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 ACTG1P11-201ENST00000425411 1125 ntBASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 HLA-DQB2-229ENST00000411527 1059 ntBASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 KRT18P43-201ENST00000469825 1281 ntBASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 CNN2P10-201ENST00000443067 918 ntBASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 AC009486.1-201ENST00000569860 813 ntBASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC10.76□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms