Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SMARCC2Q8TAQ2 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCC2Q8TAQ2 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.13■□□□□ 0.65
SMARCC2Q8TAQ2 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCC2Q8TAQ2 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCC2Q8TAQ2 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCC2Q8TAQ2 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCC2Q8TAQ2 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCC2Q8TAQ2 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCC2Q8TAQ2 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCC2Q8TAQ2 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC19.12■□□□□ 0.65
SMARCC2Q8TAQ2 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC19.12■□□□□ 0.65
SMARCC2Q8TAQ2 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
SMARCC2Q8TAQ2 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SMARCC2Q8TAQ2 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SMARCC2Q8TAQ2 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCC2Q8TAQ2 AC069224.1-201ENST00000566372 1715 ntBASIC19.12■□□□□ 0.65
SMARCC2Q8TAQ2 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCC2Q8TAQ2 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
SMARCC2Q8TAQ2 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCC2Q8TAQ2 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCC2Q8TAQ2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.12■□□□□ 0.65
SMARCC2Q8TAQ2 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCC2Q8TAQ2 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCC2Q8TAQ2 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCC2Q8TAQ2 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCC2Q8TAQ2 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCC2Q8TAQ2 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCC2Q8TAQ2 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCC2Q8TAQ2 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SMARCC2Q8TAQ2 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.12■□□□□ 0.65
SMARCC2Q8TAQ2 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCC2Q8TAQ2 AL135744.1-201ENST00000565098 629 ntBASIC19.12■□□□□ 0.65
SMARCC2Q8TAQ2 AC022145.2-201ENST00000598203 171 ntBASIC19.12■□□□□ 0.65
SMARCC2Q8TAQ2 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.12■□□□□ 0.65
SMARCC2Q8TAQ2 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCC2Q8TAQ2 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC19.12■□□□□ 0.65
SMARCC2Q8TAQ2 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCC2Q8TAQ2 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCC2Q8TAQ2 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SMARCC2Q8TAQ2 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 AKAP8P1-201ENST00000434743 1349 ntBASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 MIR648-201ENST00000385046 94 ntBASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 AC004461.1-201ENST00000412461 403 ntBASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 RN7SL589P-201ENST00000481268 310 ntBASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 LINC02447-202ENST00000501888 2146 ntBASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 KRT8P48-201ENST00000515599 1220 ntBASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 AC004835.2-201ENST00000603762 682 ntBASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 AL162727.3-201ENST00000635661 2787 ntBASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 U82695.1-201ENST00000635752 1889 ntBASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.11■□□□□ 0.65
SMARCC2Q8TAQ2 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCC2Q8TAQ2 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCC2Q8TAQ2 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCC2Q8TAQ2 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCC2Q8TAQ2 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCC2Q8TAQ2 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.1■□□□□ 0.65
SMARCC2Q8TAQ2 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
SMARCC2Q8TAQ2 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.1■□□□□ 0.65
SMARCC2Q8TAQ2 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCC2Q8TAQ2 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCC2Q8TAQ2 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.1■□□□□ 0.65
SMARCC2Q8TAQ2 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.1■□□□□ 0.65
SMARCC2Q8TAQ2 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SMARCC2Q8TAQ2 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SMARCC2Q8TAQ2 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCC2Q8TAQ2 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
SMARCC2Q8TAQ2 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
SMARCC2Q8TAQ2 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms