Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.44■□□□□ 0.38
LMO3Q8TAP4 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LMO3Q8TAP4 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LMO3Q8TAP4 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 AC011477.6-201ENST00000604980 1927 ntBASIC17.43■□□□□ 0.38
LMO3Q8TAP4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 AC134407.2-201ENST00000625089 1978 ntBASIC17.43■□□□□ 0.38
LMO3Q8TAP4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 AC004461.1-201ENST00000412461 403 ntBASIC17.43■□□□□ 0.38
LMO3Q8TAP4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 UPF3AP3-201ENST00000420996 769 ntBASIC17.43■□□□□ 0.38
LMO3Q8TAP4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 FAM58DP-201ENST00000428076 619 ntBASIC17.43■□□□□ 0.38
LMO3Q8TAP4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 AC024267.1-201ENST00000582320 895 ntBASIC17.43■□□□□ 0.38
LMO3Q8TAP4 AC010327.4-202ENST00000591484 748 ntBASIC17.43■□□□□ 0.38
LMO3Q8TAP4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 AP3S2-216ENST00000617003 1561 ntBASIC17.43■□□□□ 0.38
LMO3Q8TAP4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMO3Q8TAP4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LMO3Q8TAP4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LMO3Q8TAP4 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LMO3Q8TAP4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LMO3Q8TAP4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LMO3Q8TAP4 AL162727.3-201ENST00000635661 2787 ntBASIC17.42■□□□□ 0.38
LMO3Q8TAP4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
LMO3Q8TAP4 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LMO3Q8TAP4 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LMO3Q8TAP4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LMO3Q8TAP4 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LMO3Q8TAP4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LMO3Q8TAP4 AL691432.1-201ENST00000596308 1422 ntBASIC17.42■□□□□ 0.38
LMO3Q8TAP4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LMO3Q8TAP4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.42■□□□□ 0.38
LMO3Q8TAP4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LMO3Q8TAP4 BX842568.4-201ENST00000421222 227 ntBASIC17.42■□□□□ 0.38
LMO3Q8TAP4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.42■□□□□ 0.38
LMO3Q8TAP4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.42■□□□□ 0.38
LMO3Q8TAP4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.42■□□□□ 0.38
LMO3Q8TAP4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LMO3Q8TAP4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.42■□□□□ 0.38
LMO3Q8TAP4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.42■□□□□ 0.38
LMO3Q8TAP4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
LMO3Q8TAP4 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LMO3Q8TAP4 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LMO3Q8TAP4 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.42■□□□□ 0.38
LMO3Q8TAP4 AP001282.1-201ENST00000531301 1499 ntBASIC17.42■□□□□ 0.38
LMO3Q8TAP4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LMO3Q8TAP4 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.42■□□□□ 0.38
LMO3Q8TAP4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LMO3Q8TAP4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LMO3Q8TAP4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.42■□□□□ 0.38
LMO3Q8TAP4 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.42■□□□□ 0.38
LMO3Q8TAP4 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
LMO3Q8TAP4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LMO3Q8TAP4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LMO3Q8TAP4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LMO3Q8TAP4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LMO3Q8TAP4 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LMO3Q8TAP4 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.41■□□□□ 0.38
LMO3Q8TAP4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
LMO3Q8TAP4 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LMO3Q8TAP4 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LMO3Q8TAP4 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LMO3Q8TAP4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms