Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 AL512356.2-201ENST00000546955 174 ntBASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 AP001059.3-201ENST00000619053 235 ntBASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 LINC00628-201ENST00000628516 1289 ntBASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
ZIC4Q8N9L1 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 TSEN15P1-201ENST00000423257 515 ntBASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 AC018529.1-201ENST00000613063 361 ntBASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZIC4Q8N9L1 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.4□□□□□ -0.1
ZIC4Q8N9L1 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZIC4Q8N9L1 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
ZIC4Q8N9L1 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.4□□□□□ -0.1
ZIC4Q8N9L1 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
ZIC4Q8N9L1 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZIC4Q8N9L1 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZIC4Q8N9L1 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.4□□□□□ -0.1
ZIC4Q8N9L1 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ZIC4Q8N9L1 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms