Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD2Q8IV50 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 MMP23A-201ENST00000234610 1017 ntBASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 MIR662-201ENST00000384847 95 ntBASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 FAM8A6P-201ENST00000407496 1135 ntBASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 CD70-202ENST00000423145 881 ntTSL 2 BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 AC092597.1-201ENST00000487352 616 ntBASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 AC122714.2-201ENST00000502787 707 ntBASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 ZNF444P1-201ENST00000559497 298 ntBASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.4□□□□□ -0.1
LYSMD2Q8IV50 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 AC103564.2-201ENST00000432853 1299 ntBASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 POU5F1P6-201ENST00000466990 990 ntBASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 AC111152.3-201ENST00000569699 673 ntBASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD2Q8IV50 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms