Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 U82695.1-201ENST00000635752 1889 ntBASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 CDC14C-201ENST00000428251 1719 ntBASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 AL591424.1-201ENST00000442569 1213 ntBASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 RNA5SP416-201ENST00000516838 111 ntBASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 AC099522.2-201ENST00000607001 744 ntBASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 AC073439.1-201ENST00000624121 1774 ntBASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF549Q6P9A3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.22■□□□□ 0.19
ZNF549Q6P9A3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF549Q6P9A3 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF549Q6P9A3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
ZNF549Q6P9A3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
ZNF549Q6P9A3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF549Q6P9A3 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF549Q6P9A3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF549Q6P9A3 AC112504.1-201ENST00000623415 1841 ntBASIC16.22■□□□□ 0.19
ZNF549Q6P9A3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF549Q6P9A3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
ZNF549Q6P9A3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF549Q6P9A3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.22■□□□□ 0.19
ZNF549Q6P9A3 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
ZNF549Q6P9A3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF549Q6P9A3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
ZNF549Q6P9A3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF549Q6P9A3 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.22■□□□□ 0.19
ZNF549Q6P9A3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF549Q6P9A3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF549Q6P9A3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF549Q6P9A3 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
ZNF549Q6P9A3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.22■□□□□ 0.19
ZNF549Q6P9A3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF549Q6P9A3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF549Q6P9A3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF549Q6P9A3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF549Q6P9A3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF549Q6P9A3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.22■□□□□ 0.19
ZNF549Q6P9A3 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF549Q6P9A3 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.22■□□□□ 0.19
ZNF549Q6P9A3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF549Q6P9A3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF549Q6P9A3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
ZNF549Q6P9A3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF549Q6P9A3 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF549Q6P9A3 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.22■□□□□ 0.19
ZNF549Q6P9A3 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.21■□□□□ 0.19
ZNF549Q6P9A3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF549Q6P9A3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF549Q6P9A3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF549Q6P9A3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.21■□□□□ 0.19
ZNF549Q6P9A3 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF549Q6P9A3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF549Q6P9A3 WASH6P-202ENST00000359512 1437 ntBASIC16.21■□□□□ 0.19
ZNF549Q6P9A3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
ZNF549Q6P9A3 LINC02447-202ENST00000501888 2146 ntBASIC16.21■□□□□ 0.19
ZNF549Q6P9A3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.21■□□□□ 0.19
ZNF549Q6P9A3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF549Q6P9A3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.21■□□□□ 0.19
ZNF549Q6P9A3 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.21■□□□□ 0.19
ZNF549Q6P9A3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ZNF549Q6P9A3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF549Q6P9A3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.21■□□□□ 0.19
ZNF549Q6P9A3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
ZNF549Q6P9A3 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms