Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
NIPAL3Q6P499 AC018845.2-201ENST00000568326 409 ntBASIC14.93□□□□□ -0.02
NIPAL3Q6P499 AC140113.2-201ENST00000604370 208 ntBASIC14.93□□□□□ -0.02
NIPAL3Q6P499 AC027601.4-201ENST00000611259 610 ntBASIC14.93□□□□□ -0.02
NIPAL3Q6P499 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NIPAL3Q6P499 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.93□□□□□ -0.02
NIPAL3Q6P499 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
NIPAL3Q6P499 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NIPAL3Q6P499 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NIPAL3Q6P499 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NIPAL3Q6P499 AC104640.1-201ENST00000562617 2109 ntBASIC14.93□□□□□ -0.02
NIPAL3Q6P499 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NIPAL3Q6P499 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.93□□□□□ -0.02
NIPAL3Q6P499 GPAA1P2-202ENST00000606848 1787 ntBASIC14.93□□□□□ -0.02
NIPAL3Q6P499 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NIPAL3Q6P499 REXO1L8P-201ENST00000604378 1897 ntBASIC14.93□□□□□ -0.02
NIPAL3Q6P499 PCGF3-213ENST00000620529 1899 ntBASIC14.93□□□□□ -0.02
NIPAL3Q6P499 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 AC012569.1-201ENST00000591191 1524 ntBASIC14.92□□□□□ -0.02
NIPAL3Q6P499 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.92□□□□□ -0.02
NIPAL3Q6P499 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 AL591424.1-201ENST00000442569 1213 ntBASIC14.92□□□□□ -0.02
NIPAL3Q6P499 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 AC096734.2-201ENST00000562054 433 ntBASIC14.92□□□□□ -0.02
NIPAL3Q6P499 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.92□□□□□ -0.02
NIPAL3Q6P499 AC007064.4-201ENST00000637740 555 ntBASIC14.92□□□□□ -0.02
NIPAL3Q6P499 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NIPAL3Q6P499 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NIPAL3Q6P499 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NIPAL3Q6P499 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NIPAL3Q6P499 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NIPAL3Q6P499 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NIPAL3Q6P499 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NIPAL3Q6P499 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
NIPAL3Q6P499 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
NIPAL3Q6P499 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
NIPAL3Q6P499 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NIPAL3Q6P499 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NIPAL3Q6P499 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NIPAL3Q6P499 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
NIPAL3Q6P499 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NIPAL3Q6P499 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
NIPAL3Q6P499 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
NIPAL3Q6P499 KRT18P3-201ENST00000451602 1288 ntBASIC14.91□□□□□ -0.02
NIPAL3Q6P499 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
NIPAL3Q6P499 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.91□□□□□ -0.02
NIPAL3Q6P499 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
NIPAL3Q6P499 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.91□□□□□ -0.02
NIPAL3Q6P499 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NIPAL3Q6P499 MIR4515-201ENST00000584082 81 ntBASIC14.91□□□□□ -0.02
NIPAL3Q6P499 CYP2A7P1-201ENST00000595391 815 ntBASIC14.91□□□□□ -0.02
NIPAL3Q6P499 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NIPAL3Q6P499 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NIPAL3Q6P499 LINC01144-201ENST00000626198 1710 ntBASIC14.91□□□□□ -0.02
NIPAL3Q6P499 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
NIPAL3Q6P499 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NIPAL3Q6P499 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.91□□□□□ -0.02
NIPAL3Q6P499 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NIPAL3Q6P499 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.91□□□□□ -0.02
NIPAL3Q6P499 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NIPAL3Q6P499 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NIPAL3Q6P499 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms