Protein–RNA interactions for Protein: Q07837

SLC3A1, Neutral and basic amino acid transport protein rBAT, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1Q07837 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SLC3A1Q07837 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC3A1Q07837 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC3A1Q07837 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC3A1Q07837 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.79□□□□□ -0.04
SLC3A1Q07837 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SLC3A1Q07837 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC3A1Q07837 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC3A1Q07837 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC3A1Q07837 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC3A1Q07837 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC3A1Q07837 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC3A1Q07837 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SLC3A1Q07837 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC3A1Q07837 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC3A1Q07837 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC3A1Q07837 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC3A1Q07837 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SLC3A1Q07837 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC3A1Q07837 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC3A1Q07837 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SLC3A1Q07837 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC3A1Q07837 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC3A1Q07837 LINC00982-205ENST00000420957 435 ntBASIC14.79□□□□□ -0.04
SLC3A1Q07837 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC3A1Q07837 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.79□□□□□ -0.04
SLC3A1Q07837 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.79□□□□□ -0.04
SLC3A1Q07837 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC3A1Q07837 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC3A1Q07837 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.79□□□□□ -0.04
SLC3A1Q07837 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
SLC3A1Q07837 RNPS1P1-201ENST00000507437 918 ntBASIC14.79□□□□□ -0.04
SLC3A1Q07837 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC3A1Q07837 C8orf49-201ENST00000525043 1968 ntBASIC14.79□□□□□ -0.04
SLC3A1Q07837 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SLC3A1Q07837 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC3A1Q07837 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.79□□□□□ -0.04
SLC3A1Q07837 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.79□□□□□ -0.04
SLC3A1Q07837 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC3A1Q07837 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.79□□□□□ -0.04
SLC3A1Q07837 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.79□□□□□ -0.04
SLC3A1Q07837 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.79□□□□□ -0.04
SLC3A1Q07837 AC004817.3-201ENST00000602957 2129 ntBASIC14.79□□□□□ -0.04
SLC3A1Q07837 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SLC3A1Q07837 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC3A1Q07837 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC3A1Q07837 AL022326.1-202ENST00000641533 845 ntBASIC14.79□□□□□ -0.04
SLC3A1Q07837 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC3A1Q07837 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC3A1Q07837 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC3A1Q07837 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC3A1Q07837 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC3A1Q07837 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
SLC3A1Q07837 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SLC3A1Q07837 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC3A1Q07837 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC3A1Q07837 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC3A1Q07837 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SLC3A1Q07837 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.78□□□□□ -0.04
SLC3A1Q07837 AC079776.2-201ENST00000641154 1609 ntBASIC14.78□□□□□ -0.04
SLC3A1Q07837 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC3A1Q07837 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
SLC3A1Q07837 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC3A1Q07837 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC3A1Q07837 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SLC3A1Q07837 SIGLEC16-201ENST00000599858 1437 ntBASIC14.78□□□□□ -0.04
SLC3A1Q07837 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SLC3A1Q07837 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC3A1Q07837 AC243591.1-201ENST00000452967 1364 ntBASIC14.78□□□□□ -0.04
SLC3A1Q07837 AC002310.6-201ENST00000624451 1377 ntBASIC14.78□□□□□ -0.04
SLC3A1Q07837 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC3A1Q07837 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC3A1Q07837 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC3A1Q07837 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC3A1Q07837 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SLC3A1Q07837 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC3A1Q07837 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.78□□□□□ -0.04
SLC3A1Q07837 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.78□□□□□ -0.04
SLC3A1Q07837 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC3A1Q07837 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SLC3A1Q07837 AC009078.2-202ENST00000463353 338 ntBASIC14.78□□□□□ -0.04
SLC3A1Q07837 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.78□□□□□ -0.04
SLC3A1Q07837 SLC25A6P4-201ENST00000586535 553 ntBASIC14.78□□□□□ -0.04
SLC3A1Q07837 TP73-AS1-207ENST00000624167 988 ntBASIC14.78□□□□□ -0.04
SLC3A1Q07837 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC3A1Q07837 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC3A1Q07837 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC3A1Q07837 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC3A1Q07837 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC3A1Q07837 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC3A1Q07837 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC3A1Q07837 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC3A1Q07837 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SLC3A1Q07837 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC3A1Q07837 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC3A1Q07837 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC3A1Q07837 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.78□□□□□ -0.04
SLC3A1Q07837 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC3A1Q07837 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC3A1Q07837 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms