Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-1P78426 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-1P78426 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.48□□□□□ -0.09
NKX6-1P78426 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.48□□□□□ -0.09
NKX6-1P78426 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-1P78426 FLJ38576-201ENST00000623820 2459 ntBASIC14.48□□□□□ -0.09
NKX6-1P78426 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
NKX6-1P78426 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-1P78426 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
NKX6-1P78426 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
NKX6-1P78426 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.47□□□□□ -0.09
NKX6-1P78426 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
NKX6-1P78426 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.47□□□□□ -0.09
NKX6-1P78426 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.47□□□□□ -0.09
NKX6-1P78426 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.47□□□□□ -0.09
NKX6-1P78426 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.47□□□□□ -0.09
NKX6-1P78426 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.47□□□□□ -0.09
NKX6-1P78426 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX6-1P78426 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX6-1P78426 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX6-1P78426 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.47□□□□□ -0.09
NKX6-1P78426 TFAMP1-201ENST00000412727 736 ntBASIC14.47□□□□□ -0.09
NKX6-1P78426 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.47□□□□□ -0.09
NKX6-1P78426 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.47□□□□□ -0.09
NKX6-1P78426 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
NKX6-1P78426 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.47□□□□□ -0.09
NKX6-1P78426 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.47□□□□□ -0.09
NKX6-1P78426 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.47□□□□□ -0.09
NKX6-1P78426 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.47□□□□□ -0.09
NKX6-1P78426 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.47□□□□□ -0.09
NKX6-1P78426 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NKX6-1P78426 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.47□□□□□ -0.09
NKX6-1P78426 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX6-1P78426 AC051619.7-201ENST00000568314 623 ntBASIC14.47□□□□□ -0.09
NKX6-1P78426 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.47□□□□□ -0.09
NKX6-1P78426 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX6-1P78426 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.47□□□□□ -0.09
NKX6-1P78426 AP001350.2-201ENST00000625104 1094 ntBASIC14.47□□□□□ -0.09
NKX6-1P78426 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.47□□□□□ -0.09
NKX6-1P78426 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
NKX6-1P78426 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX6-1P78426 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX6-1P78426 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX6-1P78426 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX6-1P78426 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX6-1P78426 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
NKX6-1P78426 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX6-1P78426 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
NKX6-1P78426 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
NKX6-1P78426 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX6-1P78426 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX6-1P78426 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
NKX6-1P78426 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.47□□□□□ -0.09
NKX6-1P78426 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX6-1P78426 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.47□□□□□ -0.09
NKX6-1P78426 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
NKX6-1P78426 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.47□□□□□ -0.09
NKX6-1P78426 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX6-1P78426 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX6-1P78426 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.47□□□□□ -0.09
NKX6-1P78426 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX6-1P78426 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.46□□□□□ -0.09
NKX6-1P78426 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
NKX6-1P78426 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NKX6-1P78426 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NKX6-1P78426 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX6-1P78426 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX6-1P78426 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX6-1P78426 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.46□□□□□ -0.09
NKX6-1P78426 AP001094.4-201ENST00000579008 2176 ntBASIC14.46□□□□□ -0.09
NKX6-1P78426 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX6-1P78426 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.46□□□□□ -0.09
NKX6-1P78426 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
NKX6-1P78426 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX6-1P78426 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
NKX6-1P78426 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.46□□□□□ -0.09
NKX6-1P78426 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.46□□□□□ -0.09
NKX6-1P78426 AC107890.1-201ENST00000422478 521 ntBASIC14.46□□□□□ -0.09
NKX6-1P78426 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.46□□□□□ -0.09
NKX6-1P78426 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.46□□□□□ -0.09
NKX6-1P78426 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.46□□□□□ -0.09
NKX6-1P78426 AC079140.1-201ENST00000508039 487 ntBASIC14.46□□□□□ -0.09
NKX6-1P78426 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.46□□□□□ -0.09
NKX6-1P78426 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.46□□□□□ -0.09
NKX6-1P78426 AL512356.2-201ENST00000546955 174 ntBASIC14.46□□□□□ -0.09
NKX6-1P78426 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.46□□□□□ -0.09
NKX6-1P78426 AC013467.2-201ENST00000605472 835 ntBASIC14.46□□□□□ -0.09
NKX6-1P78426 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
NKX6-1P78426 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX6-1P78426 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX6-1P78426 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX6-1P78426 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX6-1P78426 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.46□□□□□ -0.09
NKX6-1P78426 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX6-1P78426 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.46□□□□□ -0.09
NKX6-1P78426 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX6-1P78426 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.46□□□□□ -0.09
NKX6-1P78426 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.46□□□□□ -0.09
NKX6-1P78426 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
NKX6-1P78426 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms