Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.58■□□□□ 0.08
NR1H2P55055 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NR1H2P55055 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
NR1H2P55055 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NR1H2P55055 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.58■□□□□ 0.08
NR1H2P55055 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
NR1H2P55055 HLA-J-202ENST00000469281 1241 ntBASIC15.58■□□□□ 0.08
NR1H2P55055 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.58■□□□□ 0.08
NR1H2P55055 AC002558.1-201ENST00000488906 803 ntBASIC15.58■□□□□ 0.08
NR1H2P55055 AC093909.1-201ENST00000504731 1122 ntBASIC15.58■□□□□ 0.08
NR1H2P55055 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.58■□□□□ 0.08
NR1H2P55055 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.58■□□□□ 0.08
NR1H2P55055 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.58■□□□□ 0.08
NR1H2P55055 AP001005.1-201ENST00000571755 1248 ntBASIC15.58■□□□□ 0.08
NR1H2P55055 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NR1H2P55055 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
NR1H2P55055 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.58■□□□□ 0.08
NR1H2P55055 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
NR1H2P55055 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.58■□□□□ 0.08
NR1H2P55055 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.58■□□□□ 0.08
NR1H2P55055 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
NR1H2P55055 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NR1H2P55055 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.58■□□□□ 0.08
NR1H2P55055 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
NR1H2P55055 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NR1H2P55055 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NR1H2P55055 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NR1H2P55055 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.58■□□□□ 0.08
NR1H2P55055 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NR1H2P55055 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.58■□□□□ 0.08
NR1H2P55055 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NR1H2P55055 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.58■□□□□ 0.08
NR1H2P55055 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.58■□□□□ 0.08
NR1H2P55055 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.58■□□□□ 0.08
NR1H2P55055 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NR1H2P55055 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NR1H2P55055 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.57■□□□□ 0.08
NR1H2P55055 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NR1H2P55055 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NR1H2P55055 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.57■□□□□ 0.08
NR1H2P55055 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NR1H2P55055 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.57■□□□□ 0.08
NR1H2P55055 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
NR1H2P55055 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.57■□□□□ 0.08
NR1H2P55055 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
NR1H2P55055 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.57■□□□□ 0.08
NR1H2P55055 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
NR1H2P55055 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
NR1H2P55055 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.57■□□□□ 0.08
NR1H2P55055 AC126755.1-201ENST00000525846 6405 ntBASIC15.57■□□□□ 0.08
NR1H2P55055 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
NR1H2P55055 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
NR1H2P55055 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
NR1H2P55055 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NR1H2P55055 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.57■□□□□ 0.08
NR1H2P55055 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
NR1H2P55055 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
NR1H2P55055 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NR1H2P55055 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NR1H2P55055 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.57■□□□□ 0.08
NR1H2P55055 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.57■□□□□ 0.08
NR1H2P55055 KRT18P67-201ENST00000432816 1264 ntBASIC15.57■□□□□ 0.08
NR1H2P55055 FAM197Y8-203ENST00000450145 560 ntBASIC15.57■□□□□ 0.08
NR1H2P55055 SCARNA2-201ENST00000458748 420 ntBASIC15.57■□□□□ 0.08
NR1H2P55055 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.57■□□□□ 0.08
NR1H2P55055 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NR1H2P55055 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.57■□□□□ 0.08
NR1H2P55055 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.57■□□□□ 0.08
NR1H2P55055 AC005336.2-201ENST00000593183 939 ntBASIC15.57■□□□□ 0.08
NR1H2P55055 AC008608.2-201ENST00000606089 416 ntBASIC15.57■□□□□ 0.08
NR1H2P55055 AC120114.3-201ENST00000611923 658 ntBASIC15.57■□□□□ 0.08
NR1H2P55055 AC006538.3-201ENST00000612495 578 ntBASIC15.57■□□□□ 0.08
NR1H2P55055 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NR1H2P55055 AC006486.2-201ENST00000624246 2199 ntBASIC15.57■□□□□ 0.08
NR1H2P55055 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NR1H2P55055 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NR1H2P55055 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NR1H2P55055 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NR1H2P55055 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NR1H2P55055 FRMD8P1-201ENST00000440433 1524 ntBASIC15.57■□□□□ 0.08
NR1H2P55055 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
NR1H2P55055 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.57■□□□□ 0.08
NR1H2P55055 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
NR1H2P55055 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NR1H2P55055 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
NR1H2P55055 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NR1H2P55055 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.57■□□□□ 0.08
NR1H2P55055 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NR1H2P55055 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.56■□□□□ 0.08
NR1H2P55055 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H2P55055 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.56■□□□□ 0.08
NR1H2P55055 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
NR1H2P55055 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H2P55055 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H2P55055 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.56■□□□□ 0.08
NR1H2P55055 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
NR1H2P55055 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H2P55055 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H2P55055 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NR1H2P55055 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms