Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC22.97■■□□□ 1.27
CLTCL1P53675 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC22.97■■□□□ 1.27
CLTCL1P53675 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CLTCL1P53675 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLTCL1P53675 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLTCL1P53675 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
CLTCL1P53675 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC22.96■■□□□ 1.27
CLTCL1P53675 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLTCL1P53675 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLTCL1P53675 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC22.96■■□□□ 1.27
CLTCL1P53675 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
CLTCL1P53675 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLTCL1P53675 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
CLTCL1P53675 AGGF1P2-201ENST00000426656 2106 ntBASIC22.96■■□□□ 1.27
CLTCL1P53675 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
CLTCL1P53675 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CLTCL1P53675 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
CLTCL1P53675 HAUS4P1-201ENST00000406739 1145 ntBASIC22.96■■□□□ 1.27
CLTCL1P53675 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC22.96■■□□□ 1.27
CLTCL1P53675 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CLTCL1P53675 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC22.96■■□□□ 1.27
CLTCL1P53675 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC22.96■■□□□ 1.27
CLTCL1P53675 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC22.96■■□□□ 1.27
CLTCL1P53675 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
CLTCL1P53675 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.27
CLTCL1P53675 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CLTCL1P53675 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
CLTCL1P53675 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CLTCL1P53675 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CLTCL1P53675 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
CLTCL1P53675 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CLTCL1P53675 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC22.95■■□□□ 1.26
CLTCL1P53675 AC106760.1-201ENST00000508690 800 ntBASIC22.95■■□□□ 1.26
CLTCL1P53675 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC22.95■■□□□ 1.26
CLTCL1P53675 AC104989.1-201ENST00000519711 778 ntBASIC22.95■■□□□ 1.26
CLTCL1P53675 AL450472.2-201ENST00000603663 1156 ntBASIC22.95■■□□□ 1.26
CLTCL1P53675 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC22.95■■□□□ 1.26
CLTCL1P53675 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC22.95■■□□□ 1.26
CLTCL1P53675 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CLTCL1P53675 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
CLTCL1P53675 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CLTCL1P53675 REXO1L1P-202ENST00000608646 1974 ntBASIC22.95■■□□□ 1.26
CLTCL1P53675 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CLTCL1P53675 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CLTCL1P53675 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC22.94■■□□□ 1.26
CLTCL1P53675 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
CLTCL1P53675 AC011676.5-201ENST00000624864 2660 ntBASIC22.94■■□□□ 1.26
CLTCL1P53675 MSTO2P-201ENST00000314835 1709 ntBASIC22.94■■□□□ 1.26
CLTCL1P53675 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
CLTCL1P53675 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CLTCL1P53675 SOCS2P1-201ENST00000417727 557 ntBASIC22.94■■□□□ 1.26
CLTCL1P53675 USB1-202ENST00000423271 1217 ntTSL 2 BASIC22.94■■□□□ 1.26
CLTCL1P53675 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC22.94■■□□□ 1.26
CLTCL1P53675 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC22.94■■□□□ 1.26
CLTCL1P53675 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC22.94■■□□□ 1.26
CLTCL1P53675 AC005252.2-201ENST00000624630 1141 ntBASIC22.94■■□□□ 1.26
CLTCL1P53675 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CLTCL1P53675 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC22.94■■□□□ 1.26
CLTCL1P53675 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC22.94■■□□□ 1.26
CLTCL1P53675 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CLTCL1P53675 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CLTCL1P53675 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
CLTCL1P53675 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CLTCL1P53675 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
CLTCL1P53675 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CLTCL1P53675 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
CLTCL1P53675 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC22.94■■□□□ 1.26
CLTCL1P53675 AL607033.1-201ENST00000623900 1599 ntBASIC22.94■■□□□ 1.26
CLTCL1P53675 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC22.93■■□□□ 1.26
CLTCL1P53675 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC22.93■■□□□ 1.26
CLTCL1P53675 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC22.93■■□□□ 1.26
CLTCL1P53675 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC22.93■■□□□ 1.26
CLTCL1P53675 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC22.93■■□□□ 1.26
CLTCL1P53675 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC22.93■■□□□ 1.26
CLTCL1P53675 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
CLTCL1P53675 AC133552.6-201ENST00000613406 534 ntBASIC22.93■■□□□ 1.26
CLTCL1P53675 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC22.93■■□□□ 1.26
CLTCL1P53675 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
CLTCL1P53675 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
CLTCL1P53675 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CLTCL1P53675 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC22.93■■□□□ 1.26
CLTCL1P53675 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CLTCL1P53675 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
CLTCL1P53675 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
CLTCL1P53675 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CLTCL1P53675 KRT8P22-201ENST00000562317 1415 ntBASIC22.93■■□□□ 1.26
CLTCL1P53675 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC22.93■■□□□ 1.26
CLTCL1P53675 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
CLTCL1P53675 AL121723.1-201ENST00000445194 1519 ntBASIC22.93■■□□□ 1.26
CLTCL1P53675 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
CLTCL1P53675 BOLA2P3-201ENST00000404566 256 ntBASIC22.93■■□□□ 1.26
CLTCL1P53675 AC099336.1-201ENST00000417053 1171 ntBASIC22.93■■□□□ 1.26
CLTCL1P53675 VDAC1P7-201ENST00000462417 847 ntBASIC22.93■■□□□ 1.26
CLTCL1P53675 KRT18P43-201ENST00000469825 1281 ntBASIC22.93■■□□□ 1.26
CLTCL1P53675 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CLTCL1P53675 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC22.93■■□□□ 1.26
CLTCL1P53675 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC22.93■■□□□ 1.26
CLTCL1P53675 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC22.93■■□□□ 1.26
CLTCL1P53675 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CLTCL1P53675 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms