Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.87■□□□□ 0.45
CLCN3P51790 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLCN3P51790 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CLCN3P51790 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.87■□□□□ 0.45
CLCN3P51790 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.87■□□□□ 0.45
CLCN3P51790 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLCN3P51790 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.87■□□□□ 0.45
CLCN3P51790 CRB3P1-201ENST00000449338 276 ntBASIC17.87■□□□□ 0.45
CLCN3P51790 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.87■□□□□ 0.45
CLCN3P51790 AC135586.1-201ENST00000539323 574 ntBASIC17.87■□□□□ 0.45
CLCN3P51790 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.87■□□□□ 0.45
CLCN3P51790 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLCN3P51790 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLCN3P51790 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLCN3P51790 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CLCN3P51790 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CLCN3P51790 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLCN3P51790 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLCN3P51790 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.87■□□□□ 0.45
CLCN3P51790 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.87■□□□□ 0.45
CLCN3P51790 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.87■□□□□ 0.45
CLCN3P51790 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLCN3P51790 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLCN3P51790 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.87■□□□□ 0.45
CLCN3P51790 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLCN3P51790 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLCN3P51790 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLCN3P51790 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLCN3P51790 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLCN3P51790 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLCN3P51790 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLCN3P51790 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLCN3P51790 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLCN3P51790 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CLCN3P51790 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLCN3P51790 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.86■□□□□ 0.45
CLCN3P51790 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLCN3P51790 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLCN3P51790 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.86■□□□□ 0.45
CLCN3P51790 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.86■□□□□ 0.45
CLCN3P51790 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.86■□□□□ 0.45
CLCN3P51790 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.86■□□□□ 0.45
CLCN3P51790 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.86■□□□□ 0.45
CLCN3P51790 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.86■□□□□ 0.45
CLCN3P51790 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.86■□□□□ 0.45
CLCN3P51790 AL033527.5-202ENST00000641632 1098 ntBASIC17.86■□□□□ 0.45
CLCN3P51790 PCDHA12-202ENST00000613593 2588 ntBASIC17.86■□□□□ 0.45
CLCN3P51790 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLCN3P51790 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CLCN3P51790 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CLCN3P51790 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.86■□□□□ 0.45
CLCN3P51790 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.86■□□□□ 0.45
CLCN3P51790 REXO1L8P-201ENST00000604378 1897 ntBASIC17.86■□□□□ 0.45
CLCN3P51790 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CLCN3P51790 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLCN3P51790 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.86■□□□□ 0.45
CLCN3P51790 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLCN3P51790 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.85■□□□□ 0.45
CLCN3P51790 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLCN3P51790 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLCN3P51790 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLCN3P51790 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLCN3P51790 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLCN3P51790 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.85■□□□□ 0.45
CLCN3P51790 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLCN3P51790 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CLCN3P51790 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
CLCN3P51790 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLCN3P51790 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLCN3P51790 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLCN3P51790 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.85■□□□□ 0.45
CLCN3P51790 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.85■□□□□ 0.45
CLCN3P51790 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLCN3P51790 SERBP1P3-201ENST00000459980 809 ntBASIC17.85■□□□□ 0.45
CLCN3P51790 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLCN3P51790 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.85■□□□□ 0.45
CLCN3P51790 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.85■□□□□ 0.45
CLCN3P51790 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLCN3P51790 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLCN3P51790 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.85■□□□□ 0.45
CLCN3P51790 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLCN3P51790 AL592424.1-201ENST00000563624 1536 ntBASIC17.85■□□□□ 0.45
CLCN3P51790 AC104794.3-201ENST00000566840 1248 ntBASIC17.85■□□□□ 0.45
CLCN3P51790 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.85■□□□□ 0.45
CLCN3P51790 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.85■□□□□ 0.45
CLCN3P51790 AC004790.1-201ENST00000612686 536 ntBASIC17.85■□□□□ 0.45
CLCN3P51790 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
CLCN3P51790 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.85■□□□□ 0.45
CLCN3P51790 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLCN3P51790 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
CLCN3P51790 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCN3P51790 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CLCN3P51790 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLCN3P51790 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.84■□□□□ 0.45
CLCN3P51790 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCN3P51790 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.84■□□□□ 0.45
CLCN3P51790 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.84■□□□□ 0.45
CLCN3P51790 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCN3P51790 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCN3P51790 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms