Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.96■□□□□ 0.47
CPT1AP50416 AC105020.1-201ENST00000435356 2205 ntBASIC17.96■□□□□ 0.47
CPT1AP50416 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPT1AP50416 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPT1AP50416 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CPT1AP50416 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CPT1AP50416 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CPT1AP50416 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.96■□□□□ 0.46
CPT1AP50416 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
CPT1AP50416 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.96■□□□□ 0.46
CPT1AP50416 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPT1AP50416 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CPT1AP50416 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
CPT1AP50416 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPT1AP50416 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPT1AP50416 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPT1AP50416 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.95■□□□□ 0.46
CPT1AP50416 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.95■□□□□ 0.46
CPT1AP50416 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
CPT1AP50416 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.95■□□□□ 0.46
CPT1AP50416 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CPT1AP50416 AC022210.1-201ENST00000449856 793 ntBASIC17.95■□□□□ 0.46
CPT1AP50416 AC245100.5-201ENST00000452108 331 ntBASIC17.95■□□□□ 0.46
CPT1AP50416 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.95■□□□□ 0.46
CPT1AP50416 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.95■□□□□ 0.46
CPT1AP50416 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CPT1AP50416 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CPT1AP50416 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPT1AP50416 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.95■□□□□ 0.46
CPT1AP50416 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.95■□□□□ 0.46
CPT1AP50416 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.95■□□□□ 0.46
CPT1AP50416 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CPT1AP50416 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPT1AP50416 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CPT1AP50416 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CPT1AP50416 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPT1AP50416 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CPT1AP50416 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CPT1AP50416 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPT1AP50416 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.94■□□□□ 0.46
CPT1AP50416 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPT1AP50416 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.94■□□□□ 0.46
CPT1AP50416 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CPT1AP50416 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPT1AP50416 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPT1AP50416 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CPT1AP50416 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CPT1AP50416 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPT1AP50416 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CPT1AP50416 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CPT1AP50416 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CPT1AP50416 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPT1AP50416 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPT1AP50416 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPT1AP50416 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPT1AP50416 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
CPT1AP50416 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.94■□□□□ 0.46
CPT1AP50416 AC234783.1-201ENST00000441761 496 ntBASIC17.94■□□□□ 0.46
CPT1AP50416 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CPT1AP50416 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.94■□□□□ 0.46
CPT1AP50416 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.94■□□□□ 0.46
CPT1AP50416 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.94■□□□□ 0.46
CPT1AP50416 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.94■□□□□ 0.46
CPT1AP50416 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.94■□□□□ 0.46
CPT1AP50416 AC243562.2-201ENST00000561247 970 ntBASIC17.94■□□□□ 0.46
CPT1AP50416 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.94■□□□□ 0.46
CPT1AP50416 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.94■□□□□ 0.46
CPT1AP50416 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.94■□□□□ 0.46
CPT1AP50416 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CPT1AP50416 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPT1AP50416 AC015936.2-201ENST00000593177 259 ntBASIC17.94■□□□□ 0.46
CPT1AP50416 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPT1AP50416 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CPT1AP50416 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPT1AP50416 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CPT1AP50416 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.94■□□□□ 0.46
CPT1AP50416 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPT1AP50416 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CPT1AP50416 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPT1AP50416 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPT1AP50416 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPT1AP50416 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.94■□□□□ 0.46
CPT1AP50416 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CPT1AP50416 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CPT1AP50416 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CPT1AP50416 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPT1AP50416 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.93■□□□□ 0.46
CPT1AP50416 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
CPT1AP50416 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CPT1AP50416 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPT1AP50416 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPT1AP50416 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPT1AP50416 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CPT1AP50416 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CPT1AP50416 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPT1AP50416 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.93■□□□□ 0.46
CPT1AP50416 AL691432.1-201ENST00000596308 1422 ntBASIC17.93■□□□□ 0.46
CPT1AP50416 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPT1AP50416 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPT1AP50416 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms