Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.91□□□□□ -0.02
CENPAP49450 MIR4492-201ENST00000581627 80 ntBASIC14.91□□□□□ -0.02
CENPAP49450 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.91□□□□□ -0.02
CENPAP49450 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.91□□□□□ -0.02
CENPAP49450 MIR1199-201ENST00000621445 119 ntBASIC14.91□□□□□ -0.02
CENPAP49450 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.91□□□□□ -0.02
CENPAP49450 AP001350.2-201ENST00000625104 1094 ntBASIC14.91□□□□□ -0.02
CENPAP49450 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CENPAP49450 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.91□□□□□ -0.02
CENPAP49450 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CENPAP49450 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.91□□□□□ -0.02
CENPAP49450 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CENPAP49450 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CENPAP49450 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
CENPAP49450 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CENPAP49450 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CENPAP49450 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CENPAP49450 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CENPAP49450 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CENPAP49450 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.9□□□□□ -0.02
CENPAP49450 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CENPAP49450 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CENPAP49450 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.9□□□□□ -0.02
CENPAP49450 OR2I1P-210ENST00000642037 4691 ntBASIC14.9□□□□□ -0.02
CENPAP49450 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
CENPAP49450 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
CENPAP49450 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CENPAP49450 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CENPAP49450 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CENPAP49450 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CENPAP49450 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.9□□□□□ -0.02
CENPAP49450 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CENPAP49450 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CENPAP49450 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CENPAP49450 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CENPAP49450 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CENPAP49450 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CENPAP49450 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.9□□□□□ -0.02
CENPAP49450 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CENPAP49450 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CENPAP49450 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CENPAP49450 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.9□□□□□ -0.02
CENPAP49450 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CENPAP49450 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CENPAP49450 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.9□□□□□ -0.02
CENPAP49450 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.9□□□□□ -0.02
CENPAP49450 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.9□□□□□ -0.02
CENPAP49450 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CENPAP49450 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.9□□□□□ -0.02
CENPAP49450 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.9□□□□□ -0.02
CENPAP49450 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.9□□□□□ -0.02
CENPAP49450 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.9□□□□□ -0.02
CENPAP49450 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.9□□□□□ -0.02
CENPAP49450 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.9□□□□□ -0.02
CENPAP49450 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.9□□□□□ -0.02
CENPAP49450 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
CENPAP49450 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CENPAP49450 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CENPAP49450 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CENPAP49450 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CENPAP49450 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.9□□□□□ -0.02
CENPAP49450 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CENPAP49450 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CENPAP49450 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.9□□□□□ -0.02
CENPAP49450 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CENPAP49450 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
CENPAP49450 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CENPAP49450 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CENPAP49450 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CENPAP49450 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.9□□□□□ -0.02
CENPAP49450 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.9□□□□□ -0.02
CENPAP49450 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CENPAP49450 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CENPAP49450 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CENPAP49450 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.9□□□□□ -0.02
CENPAP49450 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.9□□□□□ -0.02
CENPAP49450 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CENPAP49450 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.9□□□□□ -0.02
CENPAP49450 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CENPAP49450 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CENPAP49450 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CENPAP49450 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CENPAP49450 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CENPAP49450 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.89□□□□□ -0.03
CENPAP49450 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CENPAP49450 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CENPAP49450 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CENPAP49450 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CENPAP49450 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
CENPAP49450 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CENPAP49450 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CENPAP49450 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CENPAP49450 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CENPAP49450 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.89□□□□□ -0.03
CENPAP49450 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CENPAP49450 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.89□□□□□ -0.03
CENPAP49450 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.89□□□□□ -0.03
CENPAP49450 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.89□□□□□ -0.03
CENPAP49450 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.89□□□□□ -0.03
CENPAP49450 POU5F1P6-201ENST00000466990 990 ntBASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms