Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 CDC14C-201ENST00000428251 1719 ntBASIC16.66■□□□□ 0.26
PTPN3P26045 ADH5P3-201ENST00000433842 1137 ntBASIC16.66■□□□□ 0.26
PTPN3P26045 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
PTPN3P26045 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN3P26045 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.66■□□□□ 0.26
PTPN3P26045 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.66■□□□□ 0.26
PTPN3P26045 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.66■□□□□ 0.26
PTPN3P26045 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.66■□□□□ 0.26
PTPN3P26045 AL135744.1-201ENST00000565098 629 ntBASIC16.66■□□□□ 0.26
PTPN3P26045 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.66■□□□□ 0.26
PTPN3P26045 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.66■□□□□ 0.26
PTPN3P26045 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.66■□□□□ 0.26
PTPN3P26045 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
PTPN3P26045 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN3P26045 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN3P26045 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN3P26045 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN3P26045 PMS2P7-201ENST00000506558 1336 ntBASIC16.66■□□□□ 0.26
PTPN3P26045 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN3P26045 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN3P26045 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN3P26045 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.66■□□□□ 0.26
PTPN3P26045 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PTPN3P26045 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN3P26045 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN3P26045 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN3P26045 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN3P26045 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN3P26045 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.65■□□□□ 0.26
PTPN3P26045 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN3P26045 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN3P26045 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PTPN3P26045 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN3P26045 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.65■□□□□ 0.26
PTPN3P26045 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN3P26045 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN3P26045 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.65■□□□□ 0.26
PTPN3P26045 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN3P26045 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PTPN3P26045 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN3P26045 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.65■□□□□ 0.26
PTPN3P26045 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN3P26045 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
PTPN3P26045 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.65■□□□□ 0.26
PTPN3P26045 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.65■□□□□ 0.26
PTPN3P26045 AC073389.1-201ENST00000595595 795 ntBASIC16.65■□□□□ 0.26
PTPN3P26045 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.65■□□□□ 0.26
PTPN3P26045 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.65■□□□□ 0.26
PTPN3P26045 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.65■□□□□ 0.26
PTPN3P26045 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.65■□□□□ 0.26
PTPN3P26045 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN3P26045 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN3P26045 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN3P26045 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
PTPN3P26045 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.65■□□□□ 0.26
PTPN3P26045 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN3P26045 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN3P26045 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTPN3P26045 AC069224.1-201ENST00000566372 1715 ntBASIC16.65■□□□□ 0.26
PTPN3P26045 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.65■□□□□ 0.26
PTPN3P26045 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PTPN3P26045 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
PTPN3P26045 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PTPN3P26045 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.64■□□□□ 0.25
PTPN3P26045 LINC02447-202ENST00000501888 2146 ntBASIC16.64■□□□□ 0.25
PTPN3P26045 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN3P26045 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PTPN3P26045 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN3P26045 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN3P26045 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN3P26045 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN3P26045 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN3P26045 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
PTPN3P26045 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
PTPN3P26045 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PTPN3P26045 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN3P26045 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN3P26045 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PTPN3P26045 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN3P26045 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PTPN3P26045 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN3P26045 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN3P26045 YBX2P1-201ENST00000394192 760 ntBASIC16.64■□□□□ 0.25
PTPN3P26045 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.64■□□□□ 0.25
PTPN3P26045 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.64■□□□□ 0.25
PTPN3P26045 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.64■□□□□ 0.25
PTPN3P26045 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.64■□□□□ 0.25
PTPN3P26045 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.64■□□□□ 0.25
PTPN3P26045 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.64■□□□□ 0.25
PTPN3P26045 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.64■□□□□ 0.25
PTPN3P26045 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.64■□□□□ 0.25
PTPN3P26045 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.64■□□□□ 0.25
PTPN3P26045 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN3P26045 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN3P26045 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.64■□□□□ 0.25
PTPN3P26045 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.64■□□□□ 0.25
PTPN3P26045 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN3P26045 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PTPN3P26045 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTPN3P26045 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms