Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DPA1P20036 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
HLA-DPA1P20036 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DPA1P20036 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DPA1P20036 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DPA1P20036 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.51■□□□□ 0.23
HLA-DPA1P20036 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HLA-DPA1P20036 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.51■□□□□ 0.23
HLA-DPA1P20036 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DPA1P20036 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.51■□□□□ 0.23
HLA-DPA1P20036 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.51■□□□□ 0.23
HLA-DPA1P20036 HTR5BP-201ENST00000430851 1154 ntBASIC16.51■□□□□ 0.23
HLA-DPA1P20036 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.51■□□□□ 0.23
HLA-DPA1P20036 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.51■□□□□ 0.23
HLA-DPA1P20036 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.51■□□□□ 0.23
HLA-DPA1P20036 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.51■□□□□ 0.23
HLA-DPA1P20036 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.51■□□□□ 0.23
HLA-DPA1P20036 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.51■□□□□ 0.23
HLA-DPA1P20036 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DPA1P20036 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.51■□□□□ 0.23
HLA-DPA1P20036 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DPA1P20036 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DPA1P20036 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DPA1P20036 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DPA1P20036 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HLA-DPA1P20036 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.51■□□□□ 0.23
HLA-DPA1P20036 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DPA1P20036 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DPA1P20036 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DPA1P20036 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DPA1P20036 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DPA1P20036 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DPA1P20036 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DPA1P20036 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DPA1P20036 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DPA1P20036 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DPA1P20036 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HLA-DPA1P20036 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DPA1P20036 AL391005.1-201ENST00000623953 2435 ntBASIC16.5■□□□□ 0.23
HLA-DPA1P20036 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DPA1P20036 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DPA1P20036 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DPA1P20036 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
HLA-DPA1P20036 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
HLA-DPA1P20036 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
HLA-DPA1P20036 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.5■□□□□ 0.23
HLA-DPA1P20036 AC126755.1-201ENST00000525846 6405 ntBASIC16.5■□□□□ 0.23
HLA-DPA1P20036 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DPA1P20036 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DPA1P20036 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
HLA-DPA1P20036 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DPA1P20036 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DPA1P20036 KRT18P13-201ENST00000400056 1290 ntBASIC16.5■□□□□ 0.23
HLA-DPA1P20036 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.5■□□□□ 0.23
HLA-DPA1P20036 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
HLA-DPA1P20036 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.5■□□□□ 0.23
HLA-DPA1P20036 ALG1L5P-201ENST00000482043 771 ntBASIC16.5■□□□□ 0.23
HLA-DPA1P20036 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.5■□□□□ 0.23
HLA-DPA1P20036 AC105233.2-201ENST00000523697 349 ntBASIC16.5■□□□□ 0.23
HLA-DPA1P20036 AF228730.5-201ENST00000530288 346 ntBASIC16.5■□□□□ 0.23
HLA-DPA1P20036 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.5■□□□□ 0.23
HLA-DPA1P20036 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.5■□□□□ 0.23
HLA-DPA1P20036 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.5■□□□□ 0.23
HLA-DPA1P20036 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.5■□□□□ 0.23
HLA-DPA1P20036 AC026120.1-201ENST00000611536 926 ntBASIC16.5■□□□□ 0.23
HLA-DPA1P20036 AC008267.7-201ENST00000624570 1194 ntBASIC16.5■□□□□ 0.23
HLA-DPA1P20036 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
HLA-DPA1P20036 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
HLA-DPA1P20036 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DPA1P20036 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DPA1P20036 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DPA1P20036 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.5■□□□□ 0.23
HLA-DPA1P20036 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DPA1P20036 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DPA1P20036 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DPA1P20036 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.5■□□□□ 0.23
HLA-DPA1P20036 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DPA1P20036 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.5■□□□□ 0.23
HLA-DPA1P20036 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
HLA-DPA1P20036 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.49■□□□□ 0.23
HLA-DPA1P20036 SPDYE11-202ENST00000450699 704 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms