Protein–RNA interactions for Protein: P0CW27

CCDC166, Coiled-coil domain-containing protein 166, humanhuman

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC166P0CW27 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CCDC166P0CW27 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC166P0CW27 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC166P0CW27 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC166P0CW27 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC166P0CW27 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC166P0CW27 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC166P0CW27 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC166P0CW27 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.31■□□□□ 0.2
CCDC166P0CW27 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC166P0CW27 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC166P0CW27 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC166P0CW27 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC166P0CW27 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC166P0CW27 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.31■□□□□ 0.2
CCDC166P0CW27 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC166P0CW27 PRSS29P-201ENST00000440800 595 ntBASIC16.31■□□□□ 0.2
CCDC166P0CW27 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC166P0CW27 AC108751.1-201ENST00000490852 363 ntBASIC16.31■□□□□ 0.2
CCDC166P0CW27 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC166P0CW27 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CCDC166P0CW27 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC166P0CW27 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC166P0CW27 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CCDC166P0CW27 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC166P0CW27 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC166P0CW27 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC166P0CW27 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC166P0CW27 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.31■□□□□ 0.2
CCDC166P0CW27 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC166P0CW27 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
CCDC166P0CW27 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
CCDC166P0CW27 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CCDC166P0CW27 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC166P0CW27 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC166P0CW27 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CCDC166P0CW27 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC166P0CW27 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CCDC166P0CW27 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC166P0CW27 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC166P0CW27 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC166P0CW27 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC166P0CW27 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC166P0CW27 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC166P0CW27 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CCDC166P0CW27 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC166P0CW27 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC166P0CW27 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC166P0CW27 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC166P0CW27 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC166P0CW27 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC166P0CW27 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC166P0CW27 HMGA1P7-201ENST00000406908 502 ntBASIC16.3■□□□□ 0.2
CCDC166P0CW27 AL031284.1-201ENST00000419297 478 ntBASIC16.3■□□□□ 0.2
CCDC166P0CW27 FAAHP1-202ENST00000446499 1238 ntBASIC16.3■□□□□ 0.2
CCDC166P0CW27 AL513480.1-201ENST00000451731 511 ntBASIC16.3■□□□□ 0.2
CCDC166P0CW27 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC166P0CW27 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC166P0CW27 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC166P0CW27 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC166P0CW27 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC166P0CW27 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC166P0CW27 MIR7706-201ENST00000613747 67 ntBASIC16.3■□□□□ 0.2
CCDC166P0CW27 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CCDC166P0CW27 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CCDC166P0CW27 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC166P0CW27 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC166P0CW27 AC005622.1-201ENST00000636801 1703 ntBASIC16.3■□□□□ 0.2
CCDC166P0CW27 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC166P0CW27 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC166P0CW27 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CCDC166P0CW27 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC166P0CW27 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC166P0CW27 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC166P0CW27 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC166P0CW27 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC166P0CW27 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC166P0CW27 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
CCDC166P0CW27 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC166P0CW27 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC166P0CW27 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC166P0CW27 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC166P0CW27 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC166P0CW27 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC166P0CW27 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC166P0CW27 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC166P0CW27 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CCDC166P0CW27 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC166P0CW27 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC166P0CW27 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC166P0CW27 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC166P0CW27 RNU1-129P-201ENST00000384064 167 ntBASIC16.29■□□□□ 0.2
CCDC166P0CW27 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC166P0CW27 AL450487.1-201ENST00000426799 995 ntBASIC16.29■□□□□ 0.2
CCDC166P0CW27 AC098831.1-202ENST00000438821 336 ntBASIC16.29■□□□□ 0.2
CCDC166P0CW27 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC166P0CW27 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC166P0CW27 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC166P0CW27 AP002469.2-201ENST00000531724 424 ntBASIC16.29■□□□□ 0.2
CCDC166P0CW27 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms