Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
LINGO3P0C6S8 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LINGO3P0C6S8 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINGO3P0C6S8 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINGO3P0C6S8 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.9■□□□□ 0.14
LINGO3P0C6S8 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINGO3P0C6S8 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINGO3P0C6S8 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.9■□□□□ 0.14
LINGO3P0C6S8 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LINGO3P0C6S8 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.9■□□□□ 0.14
LINGO3P0C6S8 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LINGO3P0C6S8 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINGO3P0C6S8 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.9■□□□□ 0.14
LINGO3P0C6S8 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.9■□□□□ 0.14
LINGO3P0C6S8 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LINGO3P0C6S8 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LINGO3P0C6S8 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LINGO3P0C6S8 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.9■□□□□ 0.14
LINGO3P0C6S8 AP001269.4-201ENST00000609611 512 ntBASIC15.9■□□□□ 0.14
LINGO3P0C6S8 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
LINGO3P0C6S8 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINGO3P0C6S8 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.9■□□□□ 0.14
LINGO3P0C6S8 AC009336.1-201ENST00000608941 1553 ntBASIC15.9■□□□□ 0.14
LINGO3P0C6S8 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LINGO3P0C6S8 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINGO3P0C6S8 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.9■□□□□ 0.14
LINGO3P0C6S8 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
LINGO3P0C6S8 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LINGO3P0C6S8 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINGO3P0C6S8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
LINGO3P0C6S8 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
LINGO3P0C6S8 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LINGO3P0C6S8 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.9■□□□□ 0.14
LINGO3P0C6S8 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 ME2P1-201ENST00000426028 1970 ntBASIC15.89■□□□□ 0.13
LINGO3P0C6S8 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 AP005117.1-201ENST00000584346 1413 ntBASIC15.89■□□□□ 0.13
LINGO3P0C6S8 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 UNC93B7-201ENST00000509439 705 ntBASIC15.89■□□□□ 0.13
LINGO3P0C6S8 AC106795.1-205ENST00000512851 1056 ntBASIC15.89■□□□□ 0.13
LINGO3P0C6S8 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 IFNL4P1-201ENST00000607083 540 ntBASIC15.89■□□□□ 0.13
LINGO3P0C6S8 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINGO3P0C6S8 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LINGO3P0C6S8 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINGO3P0C6S8 AC093525.9-201ENST00000624961 1746 ntBASIC15.88■□□□□ 0.13
LINGO3P0C6S8 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
LINGO3P0C6S8 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINGO3P0C6S8 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.88■□□□□ 0.13
LINGO3P0C6S8 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
LINGO3P0C6S8 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.88■□□□□ 0.13
LINGO3P0C6S8 AC004817.3-201ENST00000602957 2129 ntBASIC15.88■□□□□ 0.13
LINGO3P0C6S8 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINGO3P0C6S8 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
LINGO3P0C6S8 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
LINGO3P0C6S8 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
LINGO3P0C6S8 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
LINGO3P0C6S8 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
LINGO3P0C6S8 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINGO3P0C6S8 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.88■□□□□ 0.13
LINGO3P0C6S8 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINGO3P0C6S8 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINGO3P0C6S8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms