Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD48P09326 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD48P09326 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD48P09326 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD48P09326 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CD48P09326 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD48P09326 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CD48P09326 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD48P09326 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CD48P09326 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.94■□□□□ 0.3
CD48P09326 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
CD48P09326 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD48P09326 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD48P09326 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD48P09326 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CD48P09326 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
CD48P09326 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.93■□□□□ 0.3
CD48P09326 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
CD48P09326 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CD48P09326 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.93■□□□□ 0.3
CD48P09326 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.93■□□□□ 0.3
CD48P09326 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.93■□□□□ 0.3
CD48P09326 AL589702.1-201ENST00000641229 1509 ntBASIC16.93■□□□□ 0.3
CD48P09326 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CD48P09326 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
CD48P09326 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.93■□□□□ 0.3
CD48P09326 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.93■□□□□ 0.3
CD48P09326 PRYP6-201ENST00000514804 343 ntBASIC16.93■□□□□ 0.3
CD48P09326 AC112191.1-201ENST00000523689 701 ntBASIC16.93■□□□□ 0.3
CD48P09326 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.93■□□□□ 0.3
CD48P09326 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.93■□□□□ 0.3
CD48P09326 AC092902.6-201ENST00000641783 218 ntBASIC16.93■□□□□ 0.3
CD48P09326 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.93■□□□□ 0.3
CD48P09326 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CD48P09326 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CD48P09326 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CD48P09326 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CD48P09326 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CD48P09326 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.93■□□□□ 0.3
CD48P09326 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.93■□□□□ 0.3
CD48P09326 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CD48P09326 PRAL-201ENST00000624952 3286 ntBASIC16.93■□□□□ 0.3
CD48P09326 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CD48P09326 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.93■□□□□ 0.3
CD48P09326 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.93■□□□□ 0.3
CD48P09326 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CD48P09326 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CD48P09326 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CD48P09326 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.92■□□□□ 0.3
CD48P09326 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD48P09326 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD48P09326 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD48P09326 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD48P09326 AP003680.1-201ENST00000598970 3660 ntBASIC16.92■□□□□ 0.3
CD48P09326 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CD48P09326 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD48P09326 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD48P09326 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CD48P09326 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD48P09326 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CD48P09326 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.92■□□□□ 0.3
CD48P09326 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CD48P09326 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.92■□□□□ 0.3
CD48P09326 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.92■□□□□ 0.3
CD48P09326 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.92■□□□□ 0.3
CD48P09326 KRT18P58-201ENST00000527480 1120 ntBASIC16.92■□□□□ 0.3
CD48P09326 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.92■□□□□ 0.3
CD48P09326 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD48P09326 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CD48P09326 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD48P09326 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CD48P09326 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.92■□□□□ 0.3
CD48P09326 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.92■□□□□ 0.3
CD48P09326 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
CD48P09326 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.92■□□□□ 0.3
CD48P09326 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD48P09326 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CD48P09326 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CD48P09326 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.92■□□□□ 0.3
CD48P09326 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD48P09326 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD48P09326 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.92■□□□□ 0.3
CD48P09326 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.92■□□□□ 0.3
CD48P09326 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD48P09326 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CD48P09326 AC105917.1-201ENST00000506637 2539 ntBASIC16.92■□□□□ 0.3
CD48P09326 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.92■□□□□ 0.3
CD48P09326 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CD48P09326 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD48P09326 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CD48P09326 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.91■□□□□ 0.3
CD48P09326 FOXO1B-201ENST00000504678 1527 ntBASIC16.91■□□□□ 0.3
CD48P09326 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.91■□□□□ 0.3
CD48P09326 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CD48P09326 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD48P09326 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD48P09326 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.91■□□□□ 0.3
CD48P09326 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD48P09326 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CD48P09326 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms