Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CBX6O95503 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.39■□□□□ 0.21
CBX6O95503 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX6O95503 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX6O95503 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.39■□□□□ 0.21
CBX6O95503 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBX6O95503 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.38■□□□□ 0.21
CBX6O95503 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX6O95503 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX6O95503 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.38■□□□□ 0.21
CBX6O95503 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CBX6O95503 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX6O95503 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX6O95503 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CBX6O95503 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.38■□□□□ 0.21
CBX6O95503 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CBX6O95503 TP73-AS1-210ENST00000637775 1455 ntBASIC16.38■□□□□ 0.21
CBX6O95503 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CBX6O95503 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CBX6O95503 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CBX6O95503 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX6O95503 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.38■□□□□ 0.21
CBX6O95503 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
CBX6O95503 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.38■□□□□ 0.21
CBX6O95503 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.38■□□□□ 0.21
CBX6O95503 AC145285.3-201ENST00000564603 959 ntBASIC16.38■□□□□ 0.21
CBX6O95503 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CBX6O95503 AL691403.2-201ENST00000618460 490 ntBASIC16.38■□□□□ 0.21
CBX6O95503 NORAD-201ENST00000565493 5339 ntBASIC16.38■□□□□ 0.21
CBX6O95503 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.38■□□□□ 0.21
CBX6O95503 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX6O95503 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.38■□□□□ 0.21
CBX6O95503 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX6O95503 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.38■□□□□ 0.21
CBX6O95503 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CBX6O95503 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.38■□□□□ 0.21
CBX6O95503 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CBX6O95503 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
CBX6O95503 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CBX6O95503 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CBX6O95503 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX6O95503 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX6O95503 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CBX6O95503 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.38■□□□□ 0.21
CBX6O95503 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CBX6O95503 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CBX6O95503 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.37■□□□□ 0.21
CBX6O95503 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.37■□□□□ 0.21
CBX6O95503 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.37■□□□□ 0.21
CBX6O95503 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CBX6O95503 SNX18-202ENST00000343017 3140 ntBASIC16.37■□□□□ 0.21
CBX6O95503 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CBX6O95503 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CBX6O95503 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CBX6O95503 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CBX6O95503 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.37■□□□□ 0.21
CBX6O95503 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.37■□□□□ 0.21
CBX6O95503 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
CBX6O95503 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
CBX6O95503 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CBX6O95503 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CBX6O95503 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CBX6O95503 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CBX6O95503 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.37■□□□□ 0.21
CBX6O95503 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CBX6O95503 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CBX6O95503 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CBX6O95503 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CBX6O95503 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.37■□□□□ 0.21
CBX6O95503 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CBX6O95503 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CBX6O95503 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.37■□□□□ 0.21
CBX6O95503 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CBX6O95503 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CBX6O95503 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CBX6O95503 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CBX6O95503 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.37■□□□□ 0.21
CBX6O95503 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.37■□□□□ 0.21
CBX6O95503 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.37■□□□□ 0.21
CBX6O95503 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.37■□□□□ 0.21
CBX6O95503 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.37■□□□□ 0.21
CBX6O95503 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.37■□□□□ 0.21
CBX6O95503 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.37■□□□□ 0.21
CBX6O95503 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.37■□□□□ 0.21
CBX6O95503 AC055717.3-201ENST00000622967 595 ntBASIC16.37■□□□□ 0.21
CBX6O95503 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.37■□□□□ 0.21
CBX6O95503 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CBX6O95503 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CBX6O95503 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.37■□□□□ 0.21
CBX6O95503 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CBX6O95503 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.37■□□□□ 0.21
CBX6O95503 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CBX6O95503 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CBX6O95503 GGT3P-204ENST00000453783 1664 ntBASIC16.37■□□□□ 0.21
CBX6O95503 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
CBX6O95503 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CBX6O95503 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CBX6O95503 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CBX6O95503 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.36■□□□□ 0.21
CBX6O95503 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms