Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.06■□□□□ 0.48
LGR5O75473 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
LGR5O75473 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LGR5O75473 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LGR5O75473 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LGR5O75473 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.06■□□□□ 0.48
LGR5O75473 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.06■□□□□ 0.48
LGR5O75473 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
LGR5O75473 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
LGR5O75473 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.06■□□□□ 0.48
LGR5O75473 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.06■□□□□ 0.48
LGR5O75473 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LGR5O75473 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LGR5O75473 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.06■□□□□ 0.48
LGR5O75473 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
LGR5O75473 AL391005.1-201ENST00000623953 2435 ntBASIC18.06■□□□□ 0.48
LGR5O75473 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LGR5O75473 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LGR5O75473 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
LGR5O75473 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LGR5O75473 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LGR5O75473 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.06■□□□□ 0.48
LGR5O75473 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LGR5O75473 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.06■□□□□ 0.48
LGR5O75473 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LGR5O75473 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
LGR5O75473 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LGR5O75473 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.06■□□□□ 0.48
LGR5O75473 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.06■□□□□ 0.48
LGR5O75473 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LGR5O75473 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LGR5O75473 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LGR5O75473 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
LGR5O75473 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LGR5O75473 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LGR5O75473 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LGR5O75473 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LGR5O75473 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LGR5O75473 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.05■□□□□ 0.48
LGR5O75473 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LGR5O75473 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.05■□□□□ 0.48
LGR5O75473 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.05■□□□□ 0.48
LGR5O75473 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LGR5O75473 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LGR5O75473 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LGR5O75473 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
LGR5O75473 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LGR5O75473 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LGR5O75473 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LGR5O75473 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LGR5O75473 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.05■□□□□ 0.48
LGR5O75473 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.05■□□□□ 0.48
LGR5O75473 AC135586.1-201ENST00000539323 574 ntBASIC18.05■□□□□ 0.48
LGR5O75473 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LGR5O75473 AC044860.1-202ENST00000559481 777 ntBASIC18.05■□□□□ 0.48
LGR5O75473 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.05■□□□□ 0.48
LGR5O75473 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.05■□□□□ 0.48
LGR5O75473 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.05■□□□□ 0.48
LGR5O75473 AL132655.2-201ENST00000596276 594 ntBASIC18.05■□□□□ 0.48
LGR5O75473 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.05■□□□□ 0.48
LGR5O75473 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.05■□□□□ 0.48
LGR5O75473 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.05■□□□□ 0.48
LGR5O75473 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.05■□□□□ 0.48
LGR5O75473 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.05■□□□□ 0.48
LGR5O75473 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.05■□□□□ 0.48
LGR5O75473 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.05■□□□□ 0.48
LGR5O75473 AL136982.4-201ENST00000437689 1740 ntBASIC18.05■□□□□ 0.48
LGR5O75473 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LGR5O75473 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
LGR5O75473 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LGR5O75473 AC007541.1-201ENST00000570282 1469 ntBASIC18.05■□□□□ 0.48
LGR5O75473 HTR7P1-202ENST00000624664 4411 ntBASIC18.05■□□□□ 0.48
LGR5O75473 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LGR5O75473 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.05■□□□□ 0.48
LGR5O75473 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
LGR5O75473 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LGR5O75473 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.05■□□□□ 0.48
LGR5O75473 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.05■□□□□ 0.48
LGR5O75473 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LGR5O75473 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
LGR5O75473 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LGR5O75473 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.04■□□□□ 0.48
LGR5O75473 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
LGR5O75473 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
LGR5O75473 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LGR5O75473 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LGR5O75473 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.04■□□□□ 0.48
LGR5O75473 AC068418.2-201ENST00000577309 3703 ntBASIC18.04■□□□□ 0.48
LGR5O75473 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
LGR5O75473 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.04■□□□□ 0.48
LGR5O75473 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.04■□□□□ 0.48
LGR5O75473 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LGR5O75473 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LGR5O75473 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.04■□□□□ 0.48
LGR5O75473 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LGR5O75473 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
LGR5O75473 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.04■□□□□ 0.48
LGR5O75473 AL353779.1-201ENST00000434793 351 ntBASIC18.04■□□□□ 0.48
LGR5O75473 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
LGR5O75473 AC114501.2-201ENST00000439631 535 ntBASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms