Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC21.82■■□□□ 1.08
SBNO1A3KN83 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC21.82■■□□□ 1.08
SBNO1A3KN83 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
SBNO1A3KN83 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SBNO1A3KN83 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
SBNO1A3KN83 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
SBNO1A3KN83 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SBNO1A3KN83 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SBNO1A3KN83 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SBNO1A3KN83 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
SBNO1A3KN83 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SBNO1A3KN83 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC21.82■■□□□ 1.08
SBNO1A3KN83 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
SBNO1A3KN83 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SBNO1A3KN83 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SBNO1A3KN83 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SBNO1A3KN83 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
SBNO1A3KN83 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SBNO1A3KN83 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SBNO1A3KN83 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SBNO1A3KN83 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SBNO1A3KN83 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC21.82■■□□□ 1.08
SBNO1A3KN83 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC21.82■■□□□ 1.08
SBNO1A3KN83 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SBNO1A3KN83 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC21.81■■□□□ 1.08
SBNO1A3KN83 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SBNO1A3KN83 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SBNO1A3KN83 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SBNO1A3KN83 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SBNO1A3KN83 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SBNO1A3KN83 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SBNO1A3KN83 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SBNO1A3KN83 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC21.81■■□□□ 1.08
SBNO1A3KN83 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SBNO1A3KN83 SOCS2P1-201ENST00000417727 557 ntBASIC21.81■■□□□ 1.08
SBNO1A3KN83 AL355864.2-201ENST00000447420 863 ntBASIC21.81■■□□□ 1.08
SBNO1A3KN83 FTH1P14-201ENST00000482930 551 ntBASIC21.81■■□□□ 1.08
SBNO1A3KN83 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC21.81■■□□□ 1.08
SBNO1A3KN83 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC21.81■■□□□ 1.08
SBNO1A3KN83 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC21.81■■□□□ 1.08
SBNO1A3KN83 DUX4L45-201ENST00000566406 1057 ntBASIC21.81■■□□□ 1.08
SBNO1A3KN83 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC21.81■■□□□ 1.08
SBNO1A3KN83 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC21.81■■□□□ 1.08
SBNO1A3KN83 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC21.81■■□□□ 1.08
SBNO1A3KN83 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SBNO1A3KN83 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
SBNO1A3KN83 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SBNO1A3KN83 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SBNO1A3KN83 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SBNO1A3KN83 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SBNO1A3KN83 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SBNO1A3KN83 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SBNO1A3KN83 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SBNO1A3KN83 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SBNO1A3KN83 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SBNO1A3KN83 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.8■■□□□ 1.08
SBNO1A3KN83 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SBNO1A3KN83 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SBNO1A3KN83 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
SBNO1A3KN83 AC004987.2-201ENST00000395959 1148 ntBASIC21.8■■□□□ 1.08
SBNO1A3KN83 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC21.8■■□□□ 1.08
SBNO1A3KN83 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC21.8■■□□□ 1.08
SBNO1A3KN83 C2orf69P2-201ENST00000562032 1123 ntBASIC21.8■■□□□ 1.08
SBNO1A3KN83 CLUHP6-201ENST00000580789 941 ntBASIC21.8■■□□□ 1.08
SBNO1A3KN83 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC21.8■■□□□ 1.08
SBNO1A3KN83 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC21.8■■□□□ 1.08
SBNO1A3KN83 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SBNO1A3KN83 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SBNO1A3KN83 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SBNO1A3KN83 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC21.8■■□□□ 1.08
SBNO1A3KN83 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SBNO1A3KN83 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SBNO1A3KN83 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SBNO1A3KN83 AC078925.2-201ENST00000624013 1973 ntBASIC21.8■■□□□ 1.08
SBNO1A3KN83 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC21.79■■□□□ 1.08
SBNO1A3KN83 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC21.79■■□□□ 1.08
SBNO1A3KN83 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SBNO1A3KN83 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC21.79■■□□□ 1.08
SBNO1A3KN83 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SBNO1A3KN83 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SBNO1A3KN83 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SBNO1A3KN83 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SBNO1A3KN83 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC21.79■■□□□ 1.08
SBNO1A3KN83 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SBNO1A3KN83 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SBNO1A3KN83 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SBNO1A3KN83 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SBNO1A3KN83 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC21.79■■□□□ 1.08
SBNO1A3KN83 TOMM22P5-201ENST00000416399 439 ntBASIC21.79■■□□□ 1.08
SBNO1A3KN83 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SBNO1A3KN83 YBX1P6-201ENST00000442962 1002 ntBASIC21.79■■□□□ 1.08
SBNO1A3KN83 AC079316.1-201ENST00000548397 411 ntBASIC21.79■■□□□ 1.08
SBNO1A3KN83 KRT90P-201ENST00000549264 1064 ntBASIC21.79■■□□□ 1.08
SBNO1A3KN83 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC21.79■■□□□ 1.08
SBNO1A3KN83 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC21.79■■□□□ 1.08
SBNO1A3KN83 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SBNO1A3KN83 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC21.79■■□□□ 1.08
SBNO1A3KN83 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC21.79■■□□□ 1.08
SBNO1A3KN83 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
SBNO1A3KN83 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms